RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 BANF2Q9H503 90 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 SLC39A9Q9NUM3 307 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 MMP17Q9ULZ9 603 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 POLR1DQ9Y2S0 133 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 WASHC3Q9Y3C0 194 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 CXorf51AA0A1B0GTR3 108 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 SLC33A1O00400 549 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 RAB29O14966 203 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 LMX1BO60663 402 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 HAND1O96004 215 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 BGLAPP02818 100 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 CYC1P08574 325 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF20P17024 532 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 AZU1P20160 251 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 GUCA1AP43080 201 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 RAC3P60763 192 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 OR51T1Q8NGJ9 327 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 B3GALT1Q9Y5Z6 326 aa7.37□□□□□ -1.23
SRGAP1-202ENST00000537556 SAA2-SAA4A0A096LPE2 208 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 C4orf51C9J302 202 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 STATHP02808 62 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 WNT2P09544 360 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 C3orf79P0CE67 100 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 PNMTP11086 282 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 THBS3P49746 956 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 FOXL2P58012 376 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 CKS1BP61024 79 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF154Q13106 437 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF726P1Q15940 193 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 TCF23Q7RTU1 214 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 OR4F5Q8NH21 305 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 WBP2Q969T9 261 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 OR2V2Q96R30 315 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 SSBP4Q9BWG4 385 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 DOCK9Q9BZ29 2069 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 A0A0C4DFX4 3053 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 PHF1O43189 567 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 LATO43561 262 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 SRSF10O75494 262 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 GDF1P27539 372 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 SMAD3P84022 425 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 RPL18Q07020 188 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 TESK1Q15569 626 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 HLA-DRB5Q30154 266 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 WBP2NLQ6ICG8 309 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 OR4P4Q8NGL7 312 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 PLPPR1Q8TBJ4 325 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 RBM24Q9BX46 236 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 PECRQ9BY49 303 aa7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 MBNL1Q9NR56 388 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-202ENST00000537556 PPIAL4EA0A075B759 164 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PPIAL4CA0A0B4J2A2 164 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 A0A1W2PPV9 198 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 NKX2-6A6NCS4 301 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SERINC4A6NH21 518 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PPIAL4DF5H284 164 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 MLNRO43193 412 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PPIAL4FP0DN26 164 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 CCNOP22674 350 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 BLVRBP30043 206 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 OPRM1P35372 400 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SEC13P55735 322 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 NTHL1P78549 312 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 OR10J3Q5JRS4 329 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PHYHD1Q5SRE7 291 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SUMF1Q8NBK3 374 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 OR5A2Q8NGI9 324 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 NEIL1Q96FI4 390 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 KCNS1Q96KK3 526 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 FBRSQ9HAH7 460 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 MMP25Q9NPA2 562 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 NECAP2Q9NVZ3 263 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 HS3ST2Q9Y278 367 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 RNF114Q9Y508 228 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 FANCMQ8IYD8 2048 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 TRBV9A0A0B4J1U6 114 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 NUDT3O95989 172 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ASAH2BP0C7U1 165 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 CPMP14384 443 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 NPBWR2P48146 333 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 HTD2P86397 168 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ZP4Q12836 540 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 C5orf64Q2M2E5 130 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 BVES-AS1Q5T3Y7 98 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PLPP4Q5VZY2 271 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 FIGLAQ6QHK4 219 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ST6GALNAC3Q8NDV1 305 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ADAT3Q96EY9 351 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 FOXN4Q96NZ1 517 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SIGLEC12Q96PQ1 595 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 GPER1Q99527 375 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 WDR61Q9GZS3 305 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 CHODLQ9H9P2 273 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ANXA10Q9UJ72 324 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PTRH2Q9Y3E5 179 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF850A8MQ14 1090 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ALG1L2C9J202 215 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 K7EQS6 105 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms