RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 Q6ZS52 159 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 OR4X1Q8NH49 305 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 BCL7CQ8WUZ0 217 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-209ENST00000537178 FLYWCH2Q96CP2 140 aaKnown RBP9.37□□□□□ -0.91
CLIP1-209ENST00000537178 SNX22Q96L94 193 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 IGHV5-51A0A0C4DH38 117 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 RELBQ01201 579 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 KIAA0040Q15053 153 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 MPV17LQ2QL34 196 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 NCMAPQ5T1S8 102 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 C10orf113Q5VZT2 155 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 PWWP2BQ6NUJ5 590 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 THSD4Q6ZMP0 1018 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 TP53I13Q8NBR0 393 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-209ENST00000537178 OR8B12Q8NGG6 310 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 NUBPLQ8TB37 319 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 SSMEM1Q8WWF3 244 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 WDR34Q96EX3 536 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 RSRP1Q9BUV0 290 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 PRSS23O95084 383 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 IGHV3-13P01766 116 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 IGHV3-7P01780 117 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 COX6CP09669 75 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 RAE1P78406 368 aaKnown RBP9.37□□□□□ -0.91
CLIP1-209ENST00000537178 INSL4Q14641 139 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 DMKNQ6E0U4 476 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-209ENST00000537178 FAM109BQ6ICB4 259 aaPredicted RBP9.37□□□□□ -0.91
CLIP1-209ENST00000537178 LRRC75AQ8NAA5 344 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 OR2V2Q96R30 315 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 A0A1W2PRD5 423 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 A0A1W2PRF3 423 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 A0A1W2PRM7 423 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 J3QT63 122 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 PPYP01298 95 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 HTN1P15515 57 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 MSRB3Q8IXL7 192 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 OR2I1PQ8NGU4 316 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 INSIG2Q9Y5U4 225 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 E9PQ18 207 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 PATE4P0C8F1 98 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 RNF224P0DH78 156 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 DLK1P80370 383 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 ABLIM2Q6H8Q1 611 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 OR1N2Q8NGR9 330 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 COL25A1Q9BXS0 654 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-209ENST00000537178 TMEM140Q9NV12 185 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 RNF7Q9UBF6 113 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 KCNMB2Q9Y691 235 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 FAM186AA6NE01 2351 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 SNURFLB1AK76 121 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 SCGB1A1P11684 91 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 CCL2P13500 99 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 KIR3DL2P43630 455 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 ADIPOQQ15848 244 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 BVESQ8NE79 360 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 SAP30LQ9HAJ7 183 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 RABAC1Q9UI14 185 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 MRM2Q9UI43 246 aaKnown RBP9.36□□□□□ -0.91
CLIP1-209ENST00000537178 FUT9Q9Y231 359 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 ID1P41134 155 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 ASCL5Q7RTU5 278 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 GPBAR1Q8TDU6 330 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 ZG16BQ96DA0 208 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 MS4A5Q9H3V2 200 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 ZFP30Q9Y2G7 519 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 PLXNA3P51805 1871 aa9.36□□□□□ -0.91
CLIP1-209ENST00000537178 ASPDHA6ND91 283 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 PAGE4O60829 102 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 CXorf1O96002 111 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 HBZP02008 142 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 HOXC4P09017 264 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-209ENST00000537178 CD82P27701 267 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 PMELP40967 661 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 RPS4XP62701 263 aaKnown RBP9.35□□□□□ -0.91
CLIP1-209ENST00000537178 IFITM2Q01629 132 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 LRRC75BQ2VPJ9 315 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 SPANXN1Q5VSR9 72 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 WDFY1Q8IWB7 410 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 GAPTQ8N292 157 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 OR4D9Q8NGE8 314 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 DYNLRB2Q8TF09 96 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 ISOC2Q96AB3 205 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 HARBI1Q96MB7 349 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 WNT16Q9UBV4 365 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 CDC42EP3Q9UKI2 254 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 A6NJY4 79 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 OGG1O15527 345 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 SRSF10O75494 262 aaKnown RBP9.35□□□□□ -0.91
CLIP1-209ENST00000537178 IFITM3Q01628 133 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 TSPO2Q5TGU0 170 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 ZNF665Q9H7R5 613 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 PIPOXQ9P0Z9 390 aa9.35□□□□□ -0.91
CLIP1-209ENST00000537178 PCOLCE2Q9UKZ9 415 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms