RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PCDHB16Q9NRJ7 776 aa11.39□□□□□ -0.59
RTN3P1-201ENST00000536295 CNOT2Q9NZN8 540 aaKnown RBP11.39□□□□□ -0.59
RTN3P1-201ENST00000536295 MRPS28Q9Y2Q9 187 aaKnown RBP11.39□□□□□ -0.59
RTN3P1-201ENST00000536295 TRBV5-7A0A0A0MS05 114 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 A0A1W2PPI3 338 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 GPX5O75715 221 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 CELP19835 753 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 FSTP19883 344 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 DOC2BQ14184 412 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 HNF4GQ14541 408 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 OXLD1Q5BKU9 147 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 AWAT2Q6E213 333 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 C10orf99Q6UWK7 81 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 OR10A7Q8NGE5 316 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 ARL11Q969Q4 196 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 PSORS1C1Q9UIG5 152 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 MOB4Q9Y3A3 225 aa11.38□□□□□ -0.59
RTN3P1-201ENST00000536295 IGHV3-43A0A0B4J1X8 118 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 TCRBV4S1A1TA0A5B7 111 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 M0QZK8 103 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 AIPO00170 330 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 SDCBPO00560 298 aaPredicted RBP11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 IGHV3-43DP0DP04 118 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 TMEM11P17152 192 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 GZMHP20718 246 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 REG1BP48304 166 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 RAB7AP51149 207 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 WNT4P56705 351 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 CD83Q01151 205 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 GPR176Q14439 515 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 TCTEX1D4Q5JR98 221 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM53AQ6NSI3 398 aaPredicted RBP11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 DERL3Q96Q80 235 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 BANF2Q9H503 90 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 TGP01266 2768 aa11.37□□□□□ -0.59
RTN3P1-201ENST00000536295 PLXNB1O43157 2135 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 MCRIP1C9JLW8 97 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 C15orf65H3BRN8 121 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 HSD17B6O14756 317 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 CASQ2O14958 399 aaPredicted RBP11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 PIN1P1O15428 100 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 IGKV1D-33P01593 117 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 IGKV1-33P01594 117 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 MT-ND4P03905 459 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 PF4V1P10720 104 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 RAB12Q6IQ22 244 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 ZNF497Q6ZNH5 498 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 SLC16A12Q6ZSM3 486 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 MOB3BQ86TA1 216 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 THNSL2Q86YJ6 484 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 NANOGP1Q8N7R0 232 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 OR4X2Q8NGF9 303 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 OR4K15Q8NH41 348 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 FBLIM1Q8WUP2 373 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 MYDGFQ969H8 173 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 SELENOIQ9C0D9 397 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 VCXQ9H320 206 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 PLCXD1Q9NUJ7 323 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 ETAA1Q9NY74 926 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 TRAPPC2LQ9UL33 140 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 ERGIC3Q9Y282 383 aa11.36□□□□□ -0.59
RTN3P1-201ENST00000536295 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 CCRL2O00421 344 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 CRTAPO75718 401 aaPredicted RBP11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 CD33P20138 364 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 VHLP40337 213 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 INSL4Q14641 139 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 KPRPQ5T749 579 aaPredicted RBP11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 PRR18Q8N4B5 295 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 TMEM104Q8NE00 496 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 FAM46BQ96A09 425 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 SPACA1Q9HBV2 294 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 GFOD1Q9NXC2 390 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 PEX16Q9Y5Y5 336 aa11.35□□□□□ -0.59
RTN3P1-201ENST00000536295 IGHV1-3A0A0C4DH29 117 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 PSMB11A5LHX3 300 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 C12orf77C9JDV5 145 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 PTGES3LE9PB15 166 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 ORC5O43913 435 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 PF4P02776 101 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 GAPDHP04406 335 aaKnown RBP11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 MGMTP16455 207 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 MAPK3P27361 379 aaPredicted RBP11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 SYT6Q5T7P8 510 aaPredicted RBP11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 C5orf56Q8N8D9 126 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 OR10V1Q8NGI7 309 aa11.34□□□□□ -0.59
RTN3P1-201ENST00000536295 OR52M1Q8NGK5 317 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms