RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 TMEM133Q9H2Q1 129 aa9.19□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ZNF286AQ9HBT8 521 aa9.19□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ZNRD1Q9P1U0 126 aa9.19□□□□□ -0.94
TNFRSF1A-208ENST00000536194 A0A087X0M5 115 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 A0A1B0GX30 115 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 AIREO43918 545 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 IGHV4-59P01825 116 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ARG1P05089 322 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TFAP2AP05549 437 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 SNRPBP14678 240 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RCC1P18754 421 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 CD34P28906 385 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 BLVRBP30043 206 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 VEGFCP49767 419 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TMEM50BP56557 158 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 LSM3P62310 102 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RBM39Q14498 530 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 MOGAT2Q3SYC2 334 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TIMM50Q3ZCQ8 353 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 PLAC9Q5JTB6 97 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 FAM53AQ6NSI3 398 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RBMS3Q6XE24 437 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 GDPGP1Q6ZNW5 385 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 SLC16A12Q6ZSM3 486 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 C5orf24Q7Z6I8 188 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 LDLRAD3Q86YD5 345 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ZNF565Q8N9K5 539 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR13D1Q8NGV5 346 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 UBALD1Q8TB05 177 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 MRPL30Q8TCC3 161 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ZDHHC16Q969W1 377 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 NEDD4LQ96PU5 975 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 JMJD8Q96S16 334 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 URM1Q9BTM9 101 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 CLEC7AQ9BXN2 247 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 MRPS26Q9BYN8 205 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 NAA50Q9GZZ1 169 aaKnown RBP9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 IDI2-AS1Q9NZ38 188 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 DAPK2Q9UIK4 370 aa9.18□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RNF212BA8MTL3 300 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 C12orf77C9JDV5 145 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 CLDN34H7C241 214 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TRIM77I1YAP6 450 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 PAHP00439 452 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 IGLV1-47P01700 117 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 IGHV3-7P01780 117 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 FBP1P09467 338 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RAB6AP20340 208 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 IER3P46695 156 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ALDH3B2P48448 385 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 LTC4SQ16873 150 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OLFML2AQ68BL7 652 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ABHD12Q8N2K0 398 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 BEND2Q8NDZ0 799 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR4P4Q8NGL7 312 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TMEM158Q8WZ71 300 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TAF15Q92804 592 aaKnown RBP eCLIP9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 LEAP2Q969E1 77 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ARHGAP5-AS1Q96IT6 56 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 HDHD3Q9BSH5 251 aaPredicted RBP9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 PECRQ9BY49 303 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TNFRSF19Q9NS68 423 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 MBNL3Q9NUK0 354 aaKnown RBP9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RAB22AQ9UL26 194 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TRAPPC2LQ9UL33 140 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 KCNK7Q9Y2U2 307 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 FAM96BQ9Y3D0 163 aa9.17□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RAB27BO00194 218 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ORC5O43913 435 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 CA11O75493 328 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 NAPSAO96009 420 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RNASE1P07998 156 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 GZMHP20718 246 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 NFYBP25208 207 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RPS19P39019 145 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 LOXL3P58215 753 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 NCS1P62166 190 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 DYNC1I2Q13409 638 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR52W1Q6IF63 320 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR5H6Q8NGV6 325 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR1L1Q8NH94 360 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 LGALS14Q8TCE9 139 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 FAM216AQ8WUB2 273 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ZFAND2BQ8WV99 257 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 SSMEM1Q8WWF3 244 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ARL11Q969Q4 196 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 PTX4Q96A99 478 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 CHIAQ9BZP6 476 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 MEGF9Q9H1U4 602 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 PLEKHJ1Q9NW61 149 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 AK3Q9UIJ7 227 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 HSF4Q9ULV5 492 aa9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TBL2Q9Y4P3 447 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-208ENST00000536194 H3BUI4 141 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 F2RL2O00254 374 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 MFNGO00587 321 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 GABARAPO95166 117 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 RANBP1P43487 201 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms