RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ZNF16P17020 682 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-214ENST00000535493 APLNRP35414 380 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 UCP3P55916 312 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 ID3Q02535 119 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 RTP5Q14D33 572 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 RAB35Q15286 201 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 EXT1Q16394 746 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF385CQ66K41 422 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-214ENST00000535493 OR5T1Q8NG75 326 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 RDH5Q92781 318 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 OR51B6Q9H340 312 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 RARRES3Q9UL19 164 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 GAB2Q9UQC2 676 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 RNF115Q9Y4L5 304 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 LOC102723971A0A1B0GUV8 181 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 LOC102725191A0A1B0GVB3 256 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-214ENST00000535493 DEFA4P12838 97 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 TAS2R30P59541 319 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 ERVS71-1P61550 626 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 CCL7P80098 99 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 SP5Q6BEB4 398 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-214ENST00000535493 ZNF787Q6DD87 383 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 RABEPKQ7Z6M1 372 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 C1orf87Q8N0U7 546 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 CPEB3Q8NE35 698 aaKnown RBP11.48□□□□□ -0.57
HDAC4-214ENST00000535493 GTF3AQ92664 365 aaKnown RBP11.48□□□□□ -0.57
HDAC4-214ENST00000535493 GNPNAT1Q96EK6 184 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-214ENST00000535493 ATP5SQ99766 215 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 WNT5BQ9H1J7 359 aa11.48□□□□□ -0.57
HDAC4-214ENST00000535493 USF3Q68DE3 2245 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 hCG_38984A0A1B0GV85 526 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 BTBD17A6NE02 478 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 ARGFXA6NJG6 315 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 TP53I11O14683 189 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 CXCL13O43927 109 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 PTBP3O95758 552 aaKnown RBP11.47□□□□□ -0.57
HDAC4-214ENST00000535493 VDAC1P21796 283 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 FUT6P51993 359 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 ADIRFQ15847 76 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 USF2Q15853 346 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-214ENST00000535493 TMEM211Q6ICI0 200 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 WDR74Q6RFH5 385 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-214ENST00000535493 SLC35E3Q7Z769 313 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 GPR146Q96CH1 333 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 FGF23Q9GZV9 251 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-214ENST00000535493 RBKSQ9H477 322 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 PLK3Q9H4B4 646 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 TESK1Q15569 626 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 ABHD3Q8WU67 409 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 C10orf35Q96D05 121 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 TMEM38BQ9NVV0 291 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 GTF3C1Q12789 2109 aa11.47□□□□□ -0.57
HDAC4-214ENST00000535493 A0A1B0GU03 582 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 SMCO3A2RU48 225 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 CLDN34H7C241 214 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 LIFP15018 202 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 BMP5P22003 454 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 P2RY6Q15077 328 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 ASCL4Q6XD76 172 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 Q6ZSR3 168 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 OR56B2PQ8NGI1 322 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 OR4X1Q8NH49 305 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 RPUSD4Q96CM3 377 aaKnown RBP11.46□□□□□ -0.57
HDAC4-214ENST00000535493 SPIN2AQ99865 258 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 ELOVL1Q9BW60 279 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 DOCK10Q96BY6 2186 aa11.46□□□□□ -0.57
HDAC4-214ENST00000535493 PGLYRP1O75594 196 aaPredicted RBP11.46□□□□□ -0.58
HDAC4-214ENST00000535493 CNOT4O95628 575 aaKnown RBP11.46□□□□□ -0.58
HDAC4-214ENST00000535493 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 NR2C1P13056 603 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 TMEM42Q69YG0 159 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 FOXL2NBQ6ZUU3 175 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 AAED1Q7RTV5 226 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 WDR5BQ86VZ2 330 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 STX12Q86Y82 276 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 GATAD1Q8WUU5 269 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 RBMXL1Q96E39 390 aaKnown RBP11.46□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF845Q96IR2 970 aaPredicted RBP11.46□□□□□ -0.58
HDAC4-214ENST00000535493 FOXB1Q99853 325 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 Q9N2K0 584 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.58
HDAC4-214ENST00000535493 AURKAIP1Q9NWT8 199 aaPredicted RBP11.46□□□□□ -0.58
HDAC4-214ENST00000535493 ERRFI1Q9UJM3 462 aaPredicted RBP11.46□□□□□ -0.58
HDAC4-214ENST00000535493 IGHV5-10-1A0A0J9YXX1 117 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 RPL36A-HNRNPH2H7BZ11 118 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 BCAT2O15382 392 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-214ENST00000535493 SYNGR1O43759 233 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 TRAPPC6AO75865 159 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 IFNA5P01569 189 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 BCL2P10415 239 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 COL10A1Q03692 680 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 LRP11Q86VZ4 500 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
HDAC4-214ENST00000535493 ATG101Q9BSB4 218 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 OR2H1Q9GZK4 316 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 MTCH1Q9NZJ7 389 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 SEMA5BQ9P283 1151 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms