RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TMEM212A6NML5 194 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 EI24O14681 340 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 RAMP3O60896 148 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 RAB3AP20336 220 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 GZMHP20718 246 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 CDX1P47902 265 aaPredicted RBP14.12□□□□□ -0.15
UBXN1-216ENST00000533908 KCNJ3P48549 501 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 CFHR3Q02985 330 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 GPR50Q13585 617 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 RSU1Q15404 277 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 IZUMO1Q8IYV9 350 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 RNF152Q8N8N0 203 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 TSEN15Q8WW01 171 aaKnown RBP14.12□□□□□ -0.15
UBXN1-216ENST00000533908 GPER1Q99527 375 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 ASCL2Q99929 193 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 HSPB9Q9BQS6 159 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 LIN7CQ9NUP9 197 aaKnown RBP14.12□□□□□ -0.15
UBXN1-216ENST00000533908 TAS2R4Q9NYW5 299 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 ST3GAL6Q9Y274 331 aa14.12□□□□□ -0.15
UBXN1-216ENST00000533908 IGHV3-43A0A0B4J1X8 118 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 SLC31A2O15432 143 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 IGHV3-43DP0DP04 118 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 F2RL1P55085 397 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 FOXE3Q13461 319 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 DCTN2Q13561 401 aaKnown RBP14.11□□□□□ -0.15
UBXN1-216ENST00000533908 XAF1Q6GPH4 301 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 LINC00311Q8N616 119 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 OR2T10Q8NGZ9 312 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 CCDC107Q8WV48 283 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 RTN4IP1Q8WWV3 396 aaPredicted RBP14.11□□□□□ -0.15
UBXN1-216ENST00000533908 PYDC1Q8WXC3 89 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 ARL11Q969Q4 196 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 S1PR3Q99500 378 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 JAM3Q9BX67 310 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 FAM192AQ9GZU8 254 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 IFT22Q9H7X7 185 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 ZMAT5Q9UDW3 170 aaKnown RBP14.11□□□□□ -0.15
UBXN1-216ENST00000533908 ING4Q9UNL4 249 aa14.11□□□□□ -0.15
UBXN1-216ENST00000533908 STAB2Q8WWQ8 2551 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 GEMIN2O14893 280 aaKnown RBP14.1□□□□□ -0.15
UBXN1-216ENST00000533908 MPZL2O60487 215 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 VHLP40337 213 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 ECI1P42126 302 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 GP2P55259 537 aaKnown RBP14.1□□□□□ -0.15
UBXN1-216ENST00000533908 CXorf66Q5JRM2 361 aaPredicted RBP14.1□□□□□ -0.15
UBXN1-216ENST00000533908 OR52M1Q8NGK5 317 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 ORAI1Q96D31 301 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 FAM118AQ9NWS6 357 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 GFOD1Q9NXC2 390 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 FAM53CQ9NYF3 392 aa14.1□□□□□ -0.15
UBXN1-216ENST00000533908 A0A1W2PP11 408 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 H3BNX3 289 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 SDCBPO00560 298 aaPredicted RBP14.09□□□□□ -0.15
UBXN1-216ENST00000533908 OR7C1O76099 320 aaPredicted RBP14.09□□□□□ -0.15
UBXN1-216ENST00000533908 MT-ND4P03905 459 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 ELANEP08246 267 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 LIMS3P0CW19 117 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 LIMS4P0CW20 117 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 CD1BP29016 333 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 ZNF134P52741 427 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 RBM11P57052 281 aaKnown RBP14.09□□□□□ -0.15
UBXN1-216ENST00000533908 NHLRC3Q5JS37 347 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 C9orf66Q5T8R8 295 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 C8orf31Q8N9H6 132 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 OR52I1Q8NGK6 324 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 OR5M8Q8NGP6 311 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 OR8U1Q8NH10 309 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 OR52N1Q8NH53 320 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 RHOXF1Q8NHV9 184 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 MRPL48Q96GC5 212 aaKnown RBP14.09□□□□□ -0.15
UBXN1-216ENST00000533908 CYYR1Q96J86 154 aa14.09□□□□□ -0.15
UBXN1-216ENST00000533908 SIRT4Q9Y6E7 314 aaPredicted RBP14.09□□□□□ -0.15
UBXN1-216ENST00000533908 TMEM30CPA0ZSE6 113 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 SNTNA6NMZ2 147 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 SEC14L6B5MCN3 397 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 MAGEB3O15480 346 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 FADS2O95864 444 aaKnown RBP14.08□□□□□ -0.16
UBXN1-216ENST00000533908 MOSP00540 346 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 IGHG4P01861 327 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 RPSAP08865 295 aaKnown RBP14.08□□□□□ -0.16
UBXN1-216ENST00000533908 ALDH3A2P51648 485 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 GBX2P52951 348 aaPredicted RBP14.08□□□□□ -0.16
UBXN1-216ENST00000533908 KIAA0141Q14154 515 aaPredicted RBP14.08□□□□□ -0.16
UBXN1-216ENST00000533908 CBR4Q8N4T8 237 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 FAM71E2Q8N5Q1 922 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 ZNF439Q8NDP4 499 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 GON7Q9BXV9 100 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 MRPS18AQ9NVS2 196 aaKnown RBP14.08□□□□□ -0.16
UBXN1-216ENST00000533908 IL36GQ9NZH8 169 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 GMPPBQ9Y5P6 360 aa14.08□□□□□ -0.16
UBXN1-216ENST00000533908 ORC5O43913 435 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 PSMB8P28062 276 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 RASSF2P50749 326 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 MRPL28Q13084 256 aaKnown RBP14.07□□□□□ -0.16
UBXN1-216ENST00000533908 FHL3Q13643 280 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 CT45A1Q5HYN5 189 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 ASPHD1Q5U4P2 390 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 ZNF497Q6ZNH5 498 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 CT45A3Q8NHU0 189 aa14.07□□□□□ -0.16
UBXN1-216ENST00000533908 METTL9Q9H1A3 318 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms