RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 LY6LH3BQJ8 138 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 AIPO00170 330 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 SDCBPO00560 298 aaPredicted RBP8.34□□□□□ -1.07
CAPN1-225ENST00000533704 GPX5O75715 221 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 CRTAPO75718 401 aaPredicted RBP8.34□□□□□ -1.07
CAPN1-225ENST00000533704 OR2F2O95006 317 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 SNRNP70P08621 437 aaKnown RBP8.34□□□□□ -1.07
CAPN1-225ENST00000533704 FAM106CPP0CH98 169 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 IGHV3-43DP0DP04 118 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 EMX1Q04741 257 aaPredicted RBP8.34□□□□□ -1.07
CAPN1-225ENST00000533704 MADCAM1Q13477 382 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 DIAPH2-AS1Q14236 149 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 HNF4GQ14541 408 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 KHDC1LQ5JSQ8 128 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 DRAM1Q8N682 238 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 NANOGP1Q8N7R0 232 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 OR5AU1Q8NGC0 362 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 FAM46BQ96A09 425 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 RBM14Q96PK6 669 aaKnown RBP8.34□□□□□ -1.07
CAPN1-225ENST00000533704 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 TMED9Q9BVK6 235 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 SELENOIQ9C0D9 397 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 WNT10AQ9GZT5 417 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 IFT22Q9H7X7 185 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 DCLRE1BQ9H816 532 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 PLCXD1Q9NUJ7 323 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 ETAA1Q9NY74 926 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 TRAPPC2LQ9UL33 140 aa8.34□□□□□ -1.07
CAPN1-225ENST00000533704 UBE2QL1A1L167 161 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 MCRIP1C9JLW8 97 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 G3V4G9 280 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 PIN1P1O15428 100 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 OPN1MWP04001 364 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 CDK1P06493 297 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 OPN1MW2P0DN77 364 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 OPN1MW3P0DN78 364 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 MGMTP16455 207 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 TMEM11P17152 192 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 GZMHP20718 246 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 MAPK3P27361 379 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-225ENST00000533704 VHLP40337 213 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 REG1BP48304 166 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 AQP4P55087 323 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 PAX5Q02548 391 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 INSL4Q14641 139 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 RAB12Q6IQ22 244 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 FAM53AQ6NSI3 398 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-225ENST00000533704 MOB3BQ86TA1 216 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 NDUFA11Q86Y39 141 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 PRR18Q8N4B5 295 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 OR10A7Q8NGE5 316 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 OR4K15Q8NH41 348 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 TFAP2CQ92754 450 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 MYDGFQ969H8 173 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 MND1Q9BWT6 205 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 SPACA1Q9HBV2 294 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 SCN3BQ9NY72 215 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 PEX16Q9Y5Y5 336 aa8.33□□□□□ -1.08
CAPN1-225ENST00000533704 IGHV3-72A0A0B4J1Y9 119 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 A0A1W2PPI3 338 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 TCRBV4S1A1TA0A5B7 111 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 CCRL2O00421 344 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 HSD17B6O14756 317 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 IGKV1D-33P01593 117 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 IGKV1-33P01594 117 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 MT-ND4P03905 459 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 RAB7AP51149 207 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 MED22Q15528 200 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 ACSM3Q53FZ2 586 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 NKAPLQ5M9Q1 402 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 RBM48Q5RL73 367 aaKnown RBP8.32□□□□□ -1.08
CAPN1-225ENST00000533704 C6orf141Q5SZD1 244 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 FAM27D1Q5T7N8 215 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 SYT6Q5T7P8 510 aaPredicted RBP8.32□□□□□ -1.08
CAPN1-225ENST00000533704 ZNF497Q6ZNH5 498 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 NKAIN3Q8N8D7 197 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 TMEM104Q8NE00 496 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 OR4F17Q8NGA8 305 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 OR10V1Q8NGI7 309 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 SGCDQ92629 289 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 THRSPQ92748 146 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 OR4F4Q96R69 305 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 LINC00574Q9H8X3 128 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 FKBP14Q9NWM8 211 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 GNG12Q9UBI6 72 aa8.32□□□□□ -1.08
CAPN1-225ENST00000533704 ADARB2-AS1A8MUL3 147 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 C12orf77C9JDV5 145 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 C15orf65H3BRN8 121 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 M0QZK8 103 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 SPINT2O43291 252 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 ORC5O43913 435 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 MPIG6BO95866 241 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 PRB2P02812 416 aaPredicted RBP8.31□□□□□ -1.08
CAPN1-225ENST00000533704 GAPDHP04406 335 aaKnown RBP8.31□□□□□ -1.08
CAPN1-225ENST00000533704 AMY1AP04745 511 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 AMY2AP04746 511 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 CD1AP06126 327 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms