RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 Q9N2K0 584 aa9.8□□□□□ -0.84
COMMD9-208ENST00000533643 HIF1ANQ9NWT6 349 aa9.8□□□□□ -0.84
COMMD9-208ENST00000533643 TAS2R3Q9NYW6 316 aa9.8□□□□□ -0.84
COMMD9-208ENST00000533643 ONECUT1Q9UBC0 465 aa9.8□□□□□ -0.84
COMMD9-208ENST00000533643 RABL2AQ9UBK7 228 aaPredicted RBP9.8□□□□□ -0.84
COMMD9-208ENST00000533643 ZNF230Q9UIE0 474 aaPredicted RBP9.8□□□□□ -0.84
COMMD9-208ENST00000533643 RABL2BQ9UNT1 228 aa9.8□□□□□ -0.84
COMMD9-208ENST00000533643 ACANP16112 2415 aa9.8□□□□□ -0.84
COMMD9-208ENST00000533643 ARHGAP32A7KAX9 2087 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 YLPM1P49750 1951 aaKnown RBP9.79□□□□□ -0.84
COMMD9-208ENST00000533643 HIVEP1P15822 2718 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 KBTBD11-OT1A0A1B0GTJ5 212 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 MEIS3P1A6NDR6 274 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 ZNF729A6NN14 1252 aaPredicted RBP9.79□□□□□ -0.84
COMMD9-208ENST00000533643 C12orf77C9JDV5 145 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 C15orf65H3BRN8 121 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 INHBBP09529 407 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 ZNF16P17020 682 aaPredicted RBP9.79□□□□□ -0.84
COMMD9-208ENST00000533643 PTBP1P26599 531 aaKnown RBP eCLIP9.79□□□□□ -0.84
COMMD9-208ENST00000533643 DGCR2P98153 550 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 C17orf58Q2M2W7 97 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 C6orf183Q5T699 404 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 PYHIN1Q6K0P9 492 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 MOB1BQ7L9L4 216 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 GLCCI1Q86VQ1 547 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 C11orf42Q8N5U0 333 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 KIR3DL3Q8N743 410 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 GVQW1Q8N7I0 195 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 Q8N7P7 452 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 OR52I2Q8NH67 350 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 UBALD1Q8TB05 177 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 C15orf40Q8WUR7 153 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 ZNF714Q96N38 554 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 ST6GALNAC5Q9BVH7 336 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 TAF9BQ9HBM6 251 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 AKIP1Q9NQ31 210 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 CALYQ9NYX4 217 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 OPN4Q9UHM6 478 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 MAST4O15021 2626 aa9.79□□□□□ -0.84
COMMD9-208ENST00000533643 IGKV1D-8A0A087WSZ0 117 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 A0A1W2PPH5 198 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 C17orf98A8MV24 154 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 NPIPB11E5RHQ5 1161 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 M0R1W7 72 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 SULT1C2O00338 296 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 CTDSPLO15194 276 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 ORC5O43913 435 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 LPLP06858 475 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 CD99P14209 185 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 SSTR5P35346 364 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 GDNFP39905 211 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 CBX5P45973 191 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 ERVFRD-1P60508 538 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 HMGN3Q15651 99 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 ZNF79Q15937 498 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 SRSF7Q16629 238 aaKnown RBP eCLIP9.78□□□□□ -0.84
COMMD9-208ENST00000533643 PYDC2Q56P42 97 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 RNASE12Q5GAN4 147 aaKnown RBP9.78□□□□□ -0.84
COMMD9-208ENST00000533643 PRAMEF5Q5TYX0 476 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 DCAF12L2Q5VW00 463 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 TRAT1Q6PIZ9 186 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 BTNL3Q6UXE8 466 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 Q6ZS49 121 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 C1orf122Q6ZSJ8 110 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 ZNF554Q86TJ5 538 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 OR1L1Q8NH94 360 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 RFESDQ8TAC1 157 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 ARL11Q969Q4 196 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 SIRPDQ9H106 197 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 GAL3ST2Q9H3Q3 398 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 KCNIP1Q9NZI2 227 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 ANAPC10Q9UM13 185 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 MGAT4AQ9UM21 535 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 KPTNQ9Y664 436 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 DOCK11Q5JSL3 2073 aa9.78□□□□□ -0.84
COMMD9-208ENST00000533643 TRDCB7Z8K6 153 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 GABARAPH6UMI1 98 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 SPINT2O43291 252 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 GSTZ1O43708 216 aaPredicted RBP9.77□□□□□ -0.85
COMMD9-208ENST00000533643 CD5LO43866 347 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 MMP23AO75900 390 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 HBZP02008 142 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 RBP4P02753 201 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 FCER2P06734 321 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 MMP9P14780 707 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 FOSL1P15407 271 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 NAT1P18440 290 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 OMGP23515 440 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 GATA3P23771 443 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 HLA-DRB3P79483 266 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 MRPS10P82664 201 aaKnown RBP9.77□□□□□ -0.85
COMMD9-208ENST00000533643 FAHD2BQ6P2I3 314 aaPredicted RBP9.77□□□□□ -0.85
COMMD9-208ENST00000533643 HEPN1Q6WQI6 88 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 HOGA1Q86XE5 327 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 SMIM4Q8WVI0 70 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 FCAMRQ8WWV6 532 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 SNAPC3Q92966 411 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 FAHD2AQ96GK7 314 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 IDI2-AS1Q9NZ38 188 aa9.77□□□□□ -0.85
COMMD9-208ENST00000533643 MTFP1Q9UDX5 166 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms