RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 VSIG8P0DPA2 414 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 SLC35B1P78383 322 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 EBI3Q14213 229 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 LCNL1Q6ZST4 164 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 ZNF695Q8IW36 515 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 FOXRED2Q8IWF2 684 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 Q8N6K4 173 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 TMEM106AQ96A25 262 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 RAX2Q96IS3 184 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 Q96MT0 163 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 SLC29A1Q99808 456 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 MCRIP2Q9BUT9 160 aaKnown RBP13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 IFT22Q9H7X7 185 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
RPUSD4-207ENST00000532800 IGHV3-43A0A0B4J1X8 118 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 A0A1W2PP11 408 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 TMEM30CPA0ZSE6 113 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 NCBP2LA6PVI3 153 aaKnown RBP13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 SDCBPO00560 298 aaPredicted RBP13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 MPZL2O60487 215 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 GAPDHP04406 335 aaKnown RBP13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 IGHV3-43DP0DP04 118 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 SERPINA2P20848 420 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 SLC6A1P30531 599 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 GPR12P47775 334 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 RAB25P57735 213 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 DEFB136Q30KP8 78 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 NHLRC3Q5JS37 347 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 DDI2Q5TDH0 399 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 ZFP1Q6P2D0 407 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 TGIF2LXQ8IUE1 241 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 IZUMO1Q8IYV9 350 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 COMMD1Q8N668 190 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 Q8N9W7 124 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 OR52N1Q8NH53 320 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 CCDC107Q8WV48 283 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 ARL11Q969Q4 196 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 METTL9Q9H1A3 318 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 MRPS18AQ9NVS2 196 aaKnown RBP13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 IL36GQ9NZH8 169 aa13.43□□□□□ -0.26
RPUSD4-207ENST00000532800 LOC100130705A0A1B0GUX0 176 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 H0YHG0 523 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 SLC31A2O15432 143 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 RPLP1P05386 114 aaKnown RBP13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 CD2P06729 351 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 ZNF93P35789 620 aaPredicted RBP13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 SMN1Q16637 294 aaKnown RBP13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 OR2G6Q5TZ20 316 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 TMEM104Q8NE00 496 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 OR13C5Q8NGS8 318 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 TFAP2CQ92754 450 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 ABCG5Q9H222 651 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 TMEM138Q9NPI0 162 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 GFOD1Q9NXC2 390 aa13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 RPL36Q9Y3U8 105 aaKnown RBP13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 SIRT4Q9Y6E7 314 aaPredicted RBP13.42□□□□□ -0.26
RPUSD4-207ENST00000532800 MAGEA13PA6NCF6 341 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 ZNF736B4DX44 427 aaPredicted RBP13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 CCL24O00175 119 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 AP4M1O00189 453 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 CSTBP04080 98 aaKnown RBP13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 GZMHP20718 246 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 ETV1P50549 477 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 LUMP51884 338 aaPredicted RBP13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 PPP3R1P63098 170 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 ATAD3CQ5T2N8 411 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 RPL22L1Q6P5R6 122 aaKnown RBP13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 TEX38Q6PEX7 206 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 LINC00311Q8N616 119 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 OR52M1Q8NGK5 317 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 NEK7Q8TDX7 302 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 RTN4IP1Q8WWV3 396 aaPredicted RBP13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 ST6GALNAC6Q969X2 333 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 C9orf16Q9BUW7 83 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 DCLRE1BQ9H816 532 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 FGF20Q9NP95 211 aaPredicted RBP13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 PLSCR3Q9NRY6 295 aa13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 LIN7CQ9NUP9 197 aaKnown RBP13.41□□□□□ -0.26
RPUSD4-207ENST00000532800 WBP4O75554 376 aaKnown RBP13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 BDKRB2P30411 391 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 DGCR2P98153 550 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 PNLIPRP3Q17RR3 467 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 MPV17LQ2QL34 196 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 SLC22A6Q4U2R8 563 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 KLHL22Q53GT1 634 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 UNQ9370/PRO34162Q6UXP9 181 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 ZNF497Q6ZNH5 498 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 LINC00596Q86U02 117 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 CYYR1Q96J86 154 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 WWC2-AS2Q96NR7 200 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 HSPB9Q9BQS6 159 aa13.4□□□□□ -0.26
RPUSD4-207ENST00000532800 AIPO00170 330 aa13.39□□□□□ -0.27
RPUSD4-207ENST00000532800 ORC5O43913 435 aa13.39□□□□□ -0.27
RPUSD4-207ENST00000532800 LALBAP00709 142 aa13.39□□□□□ -0.27
RPUSD4-207ENST00000532800 MT-ND4P03905 459 aa13.39□□□□□ -0.27
RPUSD4-207ENST00000532800 GPR50Q13585 617 aa13.39□□□□□ -0.27
RPUSD4-207ENST00000532800 CCDC58Q4VC31 144 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms