RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 FCGR1BQ92637 280 aa14.22□□□□□ -0.13
SMG1-203ENST00000532700 S100A13Q99584 98 aa14.22□□□□□ -0.13
SMG1-203ENST00000532700 DPCDQ9BVM2 203 aaPredicted RBP14.22□□□□□ -0.13
SMG1-203ENST00000532700 ST3GAL6Q9Y274 331 aa14.22□□□□□ -0.13
SMG1-203ENST00000532700 FUOMA2VDF0 154 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 MAS1P04201 325 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 TCTEX1D4Q5JR98 221 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 OR52W1Q6IF63 320 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 ZNF773Q6PK81 442 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 RTN4RL2Q86UN3 420 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 LYPD6Q86Y78 171 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 SPARTQ8N0X7 666 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 NKAIN3Q8N8D7 197 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 OR4D6Q8NGJ1 314 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 PHYHIPQ92561 330 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 TMEM203Q969S6 136 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 PRSS22Q9GZN4 317 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 MMP28Q9H239 520 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 LINC00574Q9H8X3 128 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 PCDHB16Q9NRJ7 776 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 IL36GQ9NZH8 169 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 PITPNC1Q9UKF7 332 aa14.21□□□□□ -0.13
SMG1-203ENST00000532700 TGP01266 2768 aa14.21□□□□□ -0.14
SMG1-203ENST00000532700 LEUTXA8MZ59 168 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 NPIPB11E5RHQ5 1161 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 FBXO24O75426 580 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 IL1AP01583 271 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 GNG10P50151 68 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 GP2P55259 537 aaKnown RBP14.2□□□□□ -0.14
SMG1-203ENST00000532700 PAX5Q02548 391 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 KCTD21Q4G0X4 260 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 SLC22A6Q4U2R8 563 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 HSD17B12Q53GQ0 312 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 UBE2UQ5VVX9 321 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 C11orf88Q6PI97 169 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 C5orf24Q7Z6I8 188 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 OSR2Q8N2R0 312 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 ZNF596Q8TC21 504 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 MUL1Q969V5 352 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 SLC25A33Q9BSK2 321 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 METTL9Q9H1A3 318 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 IDI2-AS1Q9NZ38 188 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 OR6C3Q9NZP0 311 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 PSG11Q9UQ72 335 aa14.2□□□□□ -0.14
SMG1-203ENST00000532700 A0A1W2PPI3 338 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 J3QR06 171 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 ZNF780AO75290 641 aaPredicted RBP14.19□□□□□ -0.14
SMG1-203ENST00000532700 SC5DO75845 299 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 ARL6IP5O75915 188 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 OR7C1O76099 320 aaPredicted RBP14.19□□□□□ -0.14
SMG1-203ENST00000532700 PRB2P02812 416 aaPredicted RBP14.19□□□□□ -0.14
SMG1-203ENST00000532700 SRMP19623 302 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 RPS25P62851 125 aaKnown RBP14.19□□□□□ -0.14
SMG1-203ENST00000532700 NHLRC3Q5JS37 347 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 JAGN1Q8N5M9 183 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 IFT22Q9H7X7 185 aa14.19□□□□□ -0.14
SMG1-203ENST00000532700 C15orf65H3BRN8 121 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 TOR1AO14656 332 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 OPN1MWP04001 364 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 CSTBP04080 98 aaKnown RBP14.18□□□□□ -0.14
SMG1-203ENST00000532700 LPLP06858 475 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 UCHL1P09936 223 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 OPN1MW2P0DN77 364 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 OPN1MW3P0DN78 364 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 VDAC2P45880 294 aaPredicted RBP14.18□□□□□ -0.14
SMG1-203ENST00000532700 GPR176Q14439 515 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 BEAN1Q3B7T3 259 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 ABCA11PQ4W5N1 156 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 FAM27D1Q5T7N8 215 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 TMEM104Q8NE00 496 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 OR56B4Q8NH76 319 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 OR9G1Q8NH87 305 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 CCDC107Q8WV48 283 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 UQCC2Q9BRT2 126 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 NCOR1P1Q9H4R4 102 aa14.18□□□□□ -0.14
SMG1-203ENST00000532700 A0A1W2PRX2 142 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 OR2F2O95006 317 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 PSMB9P28065 219 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 SAMD5Q5TGI4 173 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 GLT8D1Q68CQ7 371 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 TMEM91Q6ZNR0 172 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 RBM14Q96PK6 669 aaKnown RBP14.17□□□□□ -0.14
SMG1-203ENST00000532700 BARHL1Q9BZE3 327 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 KCNK15Q9H427 330 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 BANF2Q9H503 90 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 LIN7BQ9HAP6 207 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 NDUFB11Q9NX14 153 aa14.17□□□□□ -0.14
SMG1-203ENST00000532700 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
SMG1-203ENST00000532700 IGHV3-43A0A0B4J1X8 118 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A18PA6NE21 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A16PA6NEW6 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A20PA6NIJ5 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A9PA6NNJ1 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A12PA8MX19 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A5PA8MXJ8 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 CCRL2O00421 344 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 SLC31A2O15432 143 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 TNFAIP8O95379 198 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 SNRNP70P08621 437 aaKnown RBP14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A15PP0C7V4 464 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms