RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ZNF561Q8N587 486 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 STXBP6Q8NFX7 210 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 MARS2Q96GW9 593 aaKnown RBP12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 SLC7A10Q9NS82 523 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 OR2W1Q9Y3N9 320 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 SYNGR1O43759 233 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 GAMTQ14353 236 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 POMT1Q9Y6A1 747 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 DLL1O00548 723 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 ERGP11308 486 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 RFLNBQ8N5W9 214 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 OR10A7Q8NGE5 316 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 ZNF519Q8TB69 540 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
PCDHA9-202ENST00000532602 TRBV5-3A0A0A0MS03 114 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 MGST3O14880 152 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 COX6A1P12074 109 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 HTR1DP28221 377 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 ADAMTS17Q8TE56 1095 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 CTDSPLO15194 276 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 GDF9O60383 454 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 TSPAN2O60636 221 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 GYPAP02724 150 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 CLEC9AQ6UXN8 241 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 RBPMS2Q6ZRY4 209 aaKnown RBP12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 Q9N2K0 584 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 ZNF737O75373 536 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 ADRA2AP08913 450 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 SLC35B1P78383 322 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 CCL8P80075 99 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 GGTLC2Q14390 218 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 LIPGQ9Y5X9 500 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 C17orf51A8MQB3 221 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 CLDN34H7C241 214 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 J3QR89 54 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 NDUFA2O43678 99 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 PRSS23O95084 383 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 NAT8BQ9UHF3 227 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 ICMTO60725 284 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 ID1P41134 155 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 NAAAQ02083 359 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 NPAS1Q99742 590 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 WFDC6Q9BQY6 131 aa12.88□□□□□ -0.35
PCDHA9-202ENST00000532602 A0A1W2PR77 199 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 RPL36A-HNRNPH2H7BZ11 118 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 TO15178 435 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 P2RY1P47900 373 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 C19orf57Q0VDD7 668 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 FAM181AQ8N9Y4 354 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 RSRP1Q9BUV0 290 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 SEC16AO15027 2179 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 MMP7P09237 267 aaPredicted RBP12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 PRDX2P32119 198 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 GZMMP51124 257 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 UCP2P55851 309 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 TEX30Q5JUR7 227 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 GAPTQ8N292 157 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 TMEM105Q8N8V8 129 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 PRSS3P2Q8NHM4 247 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 PRR19A6NJB7 356 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 MBPP02686 304 aaPredicted RBP12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 TRAPPC1Q9Y5R8 145 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 FAM209AQ5JX71 171 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 PHYHIPLQ96FC7 376 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 PLSCR3Q9NRY6 295 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 AESQ08117 197 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 ZNF714Q96N38 554 aa12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 CISD1Q9NZ45 108 aaKnown RBP12.87□□□□□ -0.35
PCDHA9-202ENST00000532602 TRBV23-1A0A0A0MS06 115 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 IFI6P09912 130 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 SFTA3P0C7M3 94 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 DAOP14920 347 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 ECSCRQ19T08 205 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 RABAC1Q9UI14 185 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 DXOO77932 396 aaKnown RBP12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 HIST1H1EP10412 219 aaKnown RBP12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 KRTDAPP60985 99 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 RANP62826 216 aaKnown RBP12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 FUT5Q11128 374 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 ST3GAL2Q16842 350 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 ASCL3Q9NQ33 180 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 NIT2Q9NQR4 276 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 CCL28Q9NRJ3 127 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 VSIG4Q9Y279 399 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 K7N7A8 449 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms