RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 FAM90A20PA6NIJ5 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 FAM90A9PA6NNJ1 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 FAM90A12PA8MX19 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 FAM90A5PA8MXJ8 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 FAM90A15PP0C7V4 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 FAM90A13PP0C7W8 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 FAM90A14PP0C7W9 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 FAM90A24PP0C7X0 464 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 BDKRB2P30411 391 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 GNG10P50151 68 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 RAB7AP51149 207 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 LAIR2Q6ISS4 152 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 DRAM1Q8N682 238 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 IL36GQ9NZH8 169 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 CKLFQ9UBR5 152 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 TPRKBQ9Y3C4 175 aa17.72■□□□□ 0.43
TRAPPC4-210ENST00000531290 TRAV39A0A0B4J263 110 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 TMEM11P17152 192 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 SSTR5P35346 364 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 WNT4P56705 351 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 RBM11P57052 281 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 YIF1BQ5BJH7 314 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 NHLRC3Q5JS37 347 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 FOXB2Q5VYV0 432 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 IZUMO2Q6UXV1 221 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 OR8H3Q8N146 312 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 IFT22Q9H7X7 185 aa17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 AURKAIP1Q9NWT8 199 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 SIRT4Q9Y6E7 314 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC4-210ENST00000531290 DSCAML1Q8TD84 2053 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 TMEM30CPA0ZSE6 113 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 PSMB11A5LHX3 300 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 GEMIN2O14893 280 aaKnown RBP17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 ZNF780AO75290 641 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 SERPINA2P20848 420 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 RIPK1Q13546 671 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 HNF4GQ14541 408 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 ATAD3CQ5T2N8 411 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 DMKNQ6E0U4 476 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 C10orf99Q6UWK7 81 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 LINC00596Q86U02 117 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 ZNF581Q9P0T4 197 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 NOTCH3Q9UM47 2321 aa17.7■□□□□ 0.42
TRAPPC4-210ENST00000531290 A0A1W2PPI3 338 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 LALBAP00709 142 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 CDK1P06493 297 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 SLC35A2P78381 396 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 DIAPH2-AS1Q14236 149 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 NANOGP1Q8N7R0 232 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 ZFP41Q8N8Y5 198 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 NEK7Q8TDX7 302 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 MND1Q9BWT6 205 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 FKBP14Q9NWM8 211 aa17.69■□□□□ 0.42
TRAPPC4-210ENST00000531290 A0A1W2PPE3 182 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 ATP6V1G2O95670 118 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 GTF2F2P13984 249 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 CELP19835 753 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 MYF6P23409 242 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 MPV17LQ2QL34 196 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 Q499Y3 187 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 SLC22A6Q4U2R8 563 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 ZNF485Q8NCK3 441 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 ARL11Q969Q4 196 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 ORAI1Q96D31 301 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 ZNF184Q99676 751 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 ANKRD60Q9BZ19 345 aa17.68■□□□□ 0.42
TRAPPC4-210ENST00000531290 PNMA8CA0A1B0GUJ8 204 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 CCRL2O00421 344 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 PLXNB1O43157 2135 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 FGF16O43320 207 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 IGKV1D-33P01593 117 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 IGKV1-33P01594 117 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 GAPDHP04406 335 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 GPR176Q14439 515 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 RNLSQ5VYX0 342 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 MOB3BQ86TA1 216 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 ZNF329Q86UD4 541 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 C5orf56Q8N8D9 126 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 OR13C5Q8NGS8 318 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 CHPT1Q8WUD6 406 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 CCDC107Q8WV48 283 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 THRSPQ92748 146 aa17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 RCC1LQ96I51 464 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-210ENST00000531290 SERPINE3A8MV23 424 aa17.66■□□□□ 0.42
TRAPPC4-210ENST00000531290 SDCBPO00560 298 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-210ENST00000531290 HSD17B6O14756 317 aa17.66■□□□□ 0.42
TRAPPC4-210ENST00000531290 DUS4LO95620 317 aaKnown RBP17.66■□□□□ 0.42
TRAPPC4-210ENST00000531290 IGFBP3P17936 291 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-210ENST00000531290 OR52M1Q8NGK5 317 aa17.66■□□□□ 0.42
TRAPPC4-210ENST00000531290 TRBV5-5A0A0J9YX44 114 aa17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 GPX5O75715 221 aa17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 MT-ND4P03905 459 aa17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 REG1BP48304 166 aa17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 ZNF816Q0VGE8 651 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 OR51D1Q8NGF3 324 aa17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 CCDC90BQ9GZT6 254 aa17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 SPACA1Q9HBV2 294 aa17.65■□□□□ 0.42
TRAPPC4-210ENST00000531290 IGHV1-3A0A0C4DH29 117 aa17.64■□□□□ 0.41
TRAPPC4-210ENST00000531290 A0A1W2PP11 408 aa17.64■□□□□ 0.41
TRAPPC4-210ENST00000531290 MCRIP1C9JLW8 97 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms