RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ZNF736B4DX44 427 aaPredicted RBP6.21□□□□□ -1.42
CD44-232ENST00000531118 ARPC1BO15143 372 aaKnown RBP6.21□□□□□ -1.42
CD44-232ENST00000531118 CCDC22O60826 627 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 TPPPO94811 219 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 HLA-DRB1P01911 266 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 CGB3P0DN86 165 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 CGB7P0DN87 165 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 ZNF44P15621 663 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 ALOX5APP20292 161 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 CD1BP29016 333 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 BLVRBP30043 206 aaPredicted RBP6.21□□□□□ -1.42
CD44-232ENST00000531118 SSTR5P35346 364 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 CHRNA7P36544 502 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 MMDQ15546 238 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 Q6ZSR3 168 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 DEFB125Q8N687 156 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 YIPF7Q8N8F6 280 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 RTN4IP1Q8WWV3 396 aaPredicted RBP6.21□□□□□ -1.42
CD44-232ENST00000531118 RGP1Q92546 391 aaPredicted RBP6.21□□□□□ -1.42
CD44-232ENST00000531118 BORCS8Q96FH0 119 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 SPACA5Q96QH8 159 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 CHST5Q9GZS9 411 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 COMMD4Q9H0A8 199 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 OR51V1Q9H2C8 321 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 ZCCHC4Q9H5U6 513 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 LAMP5Q9UJQ1 280 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 GSTK1Q9Y2Q3 226 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
CD44-232ENST00000531118 A0A1B0GTI1 187 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 SLC33A1O00400 549 aaPredicted RBP6.2□□□□□ -1.42
CD44-232ENST00000531118 SH2D1BO14796 132 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 SRSF10O75494 262 aaKnown RBP6.2□□□□□ -1.42
CD44-232ENST00000531118 GATBO75879 557 aaKnown RBP6.2□□□□□ -1.42
CD44-232ENST00000531118 CCL1P22362 96 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 FUT6P51993 359 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 RAB40BQ12829 278 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 UBE2V2Q15819 145 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 BCL2L15Q5TBC7 163 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 DEGS2Q6QHC5 323 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 IL34Q6ZMJ4 242 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 IQCF1Q8N6M8 205 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 OR9G4Q8NGQ1 327 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 KCTD14Q9BQ13 255 aaPredicted RBP6.2□□□□□ -1.42
CD44-232ENST00000531118 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 NEURL2Q9BR09 285 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 MROQ9BYG7 248 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 LINC00574Q9H8X3 128 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 HMG20AQ9NP66 347 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 KIF25Q9UIL4 384 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 FOXA2Q9Y261 457 aaPredicted RBP6.2□□□□□ -1.42
CD44-232ENST00000531118 FBXO7Q9Y3I1 522 aa6.2□□□□□ -1.42
CD44-232ENST00000531118 MEIKINA0A087WXM9 373 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 NPIPB11E5RHQ5 1161 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 LOC110117498-PIK3R3F6TDL0 507 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 NDUFAB1O14561 156 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 TXNL1O43396 289 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 NDUFB8O95169 186 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 CYB5AP00167 134 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 FABP3P05413 133 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 TFAP2AP05549 437 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 CD7P09564 240 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 ZP3P21754 424 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 FASP25445 335 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 IL3RAP26951 378 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 HTR1FP30939 366 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 RIDAP52758 137 aaKnown RBP6.19□□□□□ -1.42
CD44-232ENST00000531118 CRIP2P52943 208 aaPredicted RBP6.19□□□□□ -1.42
CD44-232ENST00000531118 ROM1Q03395 351 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 TNFRSF9Q07011 255 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 LRRC36Q1X8D7 754 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 Q6P435 159 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 LYG2Q86SG7 212 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 ZNF679Q8IYX0 411 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 ELMOD2Q8IZ81 293 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 LINC00311Q8N616 119 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 CHST4Q8NCG5 386 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 RFESDQ8TAC1 157 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 MRGPRDQ8TDS7 321 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 SAR1AQ9NR31 198 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 ETAA1Q9NY74 926 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 IKZF2Q9UKS7 526 aa6.19□□□□□ -1.42
CD44-232ENST00000531118 IGKV1-12A0A0C4DH73 117 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 HSPB6O14558 160 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 ZNF254O75437 659 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 E2F6O75461 281 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 IGKV1D-12P01611 117 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 MRPL3P09001 348 aaKnown RBP6.18□□□□□ -1.42
CD44-232ENST00000531118 HCCSP53701 268 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 TPPP2P59282 170 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 RPS7P62081 194 aaKnown RBP6.18□□□□□ -1.42
CD44-232ENST00000531118 SCN1BQ07699 218 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 APOFQ13790 326 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 PYHIN1Q6K0P9 492 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 CD300LDQ6UXZ3 194 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 PLEKHG7Q6ZR37 379 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 SLC16A12Q6ZSM3 486 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 LAX1Q8IWV1 398 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms