RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 HCP5Q6MZN7 132 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 TRAT1Q6PIZ9 186 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
CCS-206ENST00000530961 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 LGALS14Q8TCE9 139 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 MRGPRDQ8TDS7 321 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 ZNF418Q8TF45 676 aaPredicted RBP12.49□□□□□ -0.41
CCS-206ENST00000530961 DYRK2Q92630 601 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 ARHGAP5-AS1Q96IT6 56 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 SUCNR1Q9BXA5 334 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 ATG5Q9H1Y0 275 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 SPATA2Q9UM82 520 aa12.49□□□□□ -0.41
CCS-206ENST00000530961 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.49□□□□□ -0.419e-8■■■□□ 15.1
CCS-206ENST00000530961 SVEP1Q4LDE5 3571 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 A0A0A6YYJ9 748 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 NPFFO15130 113 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 NOL3O60936 208 aaKnown RBP12.48□□□□□ -0.41
CCS-206ENST00000530961 DYNC1I2Q13409 638 aaKnown RBP12.48□□□□□ -0.41
CCS-206ENST00000530961 MIDNQ504T8 468 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 PLAC9Q5JTB6 97 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 RBMS3Q6XE24 437 aaKnown RBP12.48□□□□□ -0.41
CCS-206ENST00000530961 RTN4RL2Q86UN3 420 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 PDZD9Q8IXQ8 264 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 OR11H6Q8NGC7 330 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 MRPL30Q8TCC3 161 aaKnown RBP12.48□□□□□ -0.41
CCS-206ENST00000530961 CCDC107Q8WV48 283 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 C22orf15Q8WYQ4 148 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 PECRQ9BY49 303 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 DCSTAMPQ9H295 470 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 TMEM133Q9H2Q1 129 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 MBNL3Q9NUK0 354 aaKnown RBP12.48□□□□□ -0.41
CCS-206ENST00000530961 KCNIP1Q9NZI2 227 aa12.48□□□□□ -0.41
CCS-206ENST00000530961 A0A087X0M5 115 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 TRBV6-6A0A0A6YYG2 114 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 A0A0A6YYH2 397 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 A0A1B0GX30 115 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 A6NJ64 397 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 SPINT2O43291 252 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 NAPSAO96009 420 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 COX7A1P24310 79 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 DLX1P56177 255 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 PRB3Q04118 309 aaPredicted RBP12.47□□□□□ -0.41
CCS-206ENST00000530961 KLRD1Q13241 179 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 MOGAT2Q3SYC2 334 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
CCS-206ENST00000530961 PNKDQ8N490 385 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 OR5H6Q8NGV6 325 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 OR4K15Q8NH41 348 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 ACOT12Q8WYK0 555 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 ARL11Q969Q4 196 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 PHF21AQ96BD5 680 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 SLC6A7Q99884 636 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 RHBDL2Q9NX52 303 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 IDI2-AS1Q9NZ38 188 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 AK3Q9UIJ7 227 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 FAM96BQ9Y3D0 163 aa12.47□□□□□ -0.41
CCS-206ENST00000530961 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 C15orf65H3BRN8 121 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 MMP23AO75900 390 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.41
CCS-206ENST00000530961 OMGP23515 440 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 CD34P28906 385 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 SSTR5P35346 364 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 LGALS4P56470 323 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 MRPS15P82914 257 aaKnown RBP12.46□□□□□ -0.41
CCS-206ENST00000530961 MOB1BQ7L9L4 216 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 ABHD12Q8N2K0 398 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 RFESDQ8TAC1 157 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 NDNFQ8TB73 568 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 AP3S1Q92572 193 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 KIRREL1Q96J84 757 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 JMJD8Q96S16 334 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 CMSS1Q9BQ75 279 aaKnown RBP12.46□□□□□ -0.41
CCS-206ENST00000530961 CLEC7AQ9BXN2 247 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 PRDM13Q9H4Q3 707 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 CHMP1AQ9HD42 196 aaPredicted RBP12.46□□□□□ -0.41
CCS-206ENST00000530961 C12orf4Q9NQ89 552 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 MGAT4AQ9UM21 535 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 KCNK7Q9Y2U2 307 aa12.46□□□□□ -0.41
CCS-206ENST00000530961 IGHV2-26A0A0B4J1V2 119 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 MEIOCA2RUB1 952 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 F2RL2O00254 374 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 MFNGO00587 321 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 TCF21O43680 179 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 CD3GP09693 182 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 GNB3P16520 340 aa12.45□□□□□ -0.42
CCS-206ENST00000530961 ZNF182P17025 639 aaPredicted RBP12.45□□□□□ -0.42
CCS-206ENST00000530961 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms