RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 TCF15Q12870 199 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 DAZAP2Q15038 168 aaPredicted RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR8G1Q15617 311 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 DEFB109BQ30KR1 87 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 ZNF718Q3SXZ3 478 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 DMRTC1Q5HYR2 192 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 MBNL2Q5VZF2 373 aaKnown RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 GGNBP1Q5YKI7 109 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 TRAT1Q6PIZ9 186 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 IL34Q6ZMJ4 242 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 COMMD1Q8N668 190 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 TCTEX1D1Q8N7M0 179 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 SUMF2Q8NBJ7 301 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 CLEC18CQ8NCF0 446 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 ZBTB34Q8NCN2 500 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 BVESQ8NE79 360 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR8G5Q8NG78 346 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR5T2Q8NGG2 359 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR5D13Q8NGL4 314 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR1S1Q8NH92 325 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR10J5Q8NHC4 309 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 NEK7Q8TDX7 302 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 MSI2Q96DH6 328 aaKnown RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 MARS2Q96GW9 593 aaKnown RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 C18orf12Q96KH6 178 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR10C1Q96KK4 312 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 ADAT1Q9BUB4 502 aaKnown RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 SFXN3Q9BWM7 321 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 REG4Q9BYZ8 158 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 SLC5A7Q9GZV3 580 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 FGF23Q9GZV9 251 aaPredicted RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 TLNRD1Q9H1K6 362 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 CXXC4Q9H2H0 198 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 HES4Q9HCC6 221 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 FAM212BQ9NTI7 297 aaPredicted RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 DLL3Q9NYJ7 618 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR2W1Q9Y3N9 320 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 POMT1Q9Y6A1 747 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 TRAV24A0A0B4J272 114 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 C3orf85A0A1B0GTC6 90 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 H0YIZ8 118 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 MKRN2OSH3BPM6 223 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 SYNGR1O43759 233 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 TNFSF13O75888 250 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ATG12O94817 140 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 NXPH2O95156 264 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 PTBP3O95758 552 aaKnown RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 CRYZL1O95825 349 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 CGAP01215 116 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 HOXB5P09067 269 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 OR5AC1P0C628 307 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 CCL2P13500 99 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 VDAC1P21796 283 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 LMO1P25800 156 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 RPL12P30050 165 aaKnown RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 GCH1P30793 250 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 CFHR2P36980 270 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 RAB5CP51148 216 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 S100A10P60903 97 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 PMP22Q01453 160 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ZNF154Q13106 437 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 RAB32Q13637 225 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 GNMTQ14749 295 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ATXN7L3Q14CW9 347 aaPredicted RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 SMIM21Q3B7S5 101 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 TIMM23BQ5SRD1 257 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 OR2T2Q6IF00 324 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ZNF585AQ6P3V2 769 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 Q6P435 159 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ZNF497Q6ZNH5 498 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 H1FOOQ8IZA3 346 aaPredicted RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 CNEP1R1Q8N9A8 125 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 WDR31Q8NA23 367 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 C9orf106Q8NAJ2 232 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 UBAC2Q8NBM4 344 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 SCCPDHQ8NBX0 429 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 BHLHE23Q8NDY6 225 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 PRSS33Q8NF86 280 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 OR1J1Q8NGS3 322 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 OR10Z1Q8NGY1 313 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 SLC25A40Q8TBP6 338 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 MRPL30Q8TCC3 161 aaKnown RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 KLF14Q8TD94 323 aaPredicted RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 GLYATL2Q8WU03 294 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ARL11Q969Q4 196 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 MARC2Q969Z3 335 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 DOCK7Q96N67 2140 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 OR2J1Q9GZK6 312 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 SLC25A31Q9H0C2 315 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 TOLLIPQ9H0E2 274 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 LIME1Q9H400 295 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 NCOR1P1Q9H4R4 102 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 RAB9BQ9NP90 201 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ZC4H2Q9NQZ6 224 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 ZNF71Q9NQZ8 489 aaPredicted RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 KCNIP1Q9NZI2 227 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 GSKIPQ9P0R6 139 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 TAAR3PQ9P1P4 343 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 PURGQ9UJV8 347 aaKnown RBP4.71□□□□□ -1.66
PCF11-205ENST00000530906 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms