RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 hCG_1809904A0A1W2PP81 198 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 A0A1W2PPE2 198 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 A0A1W2PR64 198 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 A0A1W2PRV1 198 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 ZNF729A6NN14 1252 aaPredicted RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 CRLF1O75462 422 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 HIST1H1DP16402 221 aaKnown RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 RCC1P18754 421 aaPredicted RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 OMGP23515 440 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 SSTR5P35346 364 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 SOX6P35712 828 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 GDNFP39905 211 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 DYNC1I2Q13409 638 aaKnown RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 CHRFAM7AQ494W8 412 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 Q6ZPA2 131 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 DTX3Q8N9I9 347 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 ZNF565Q8N9K5 539 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 UBALD1Q8TB05 177 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 AP3S1Q92572 193 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 ABCG5Q9H222 651 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 UNKLQ9H9P5 680 aaKnown RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 CALYQ9NYX4 217 aa11.46□□□□□ -0.57
USF1-209ENST00000529476 CCDC59Q9P031 241 aaKnown RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 ELF5Q9UKW6 265 aaPredicted RBP11.46□□□□□ -0.57
USF1-209ENST00000529476 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 RNASEK-C17orf49H0YIS7 233 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 ZNF701M0R085 212 aaPredicted RBP11.45□□□□□ -0.58
USF1-209ENST00000529476 HPGDSO60760 199 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 CLPXO76031 633 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 SCGNO76038 276 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 NAPSAO96009 420 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 RBP4P02753 201 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 EIF4EP06730 217 aaKnown RBP11.45□□□□□ -0.58
USF1-209ENST00000529476 IGHV1-8P0DP01 117 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 CDK2P24941 298 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 CDNFQ49AH0 187 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 FOXB2Q5VYV0 432 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 HCP5Q6MZN7 132 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 MZT2AQ6P582 158 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 BAIAP2L2Q6UXY1 529 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 C5orf24Q7Z6I8 188 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 IZUMO1Q8IYV9 350 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 TEX29Q8N6K0 151 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 RFESDQ8TAC1 157 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 SETD6Q8TBK2 473 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 PHF21AQ96BD5 680 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 CMSS1Q9BQ75 279 aaKnown RBP11.45□□□□□ -0.58
USF1-209ENST00000529476 NUP50Q9UKX7 468 aa11.45□□□□□ -0.58
USF1-209ENST00000529476 TRAV18A0A075B6X5 111 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 A0A1W2PRD5 423 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 A0A1W2PRF3 423 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 A0A1W2PRM7 423 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 NPIPB11E5RHQ5 1161 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 C15orf65H3BRN8 121 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 CD3GP09693 182 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 SRD5A1P18405 259 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 GZMHP20718 246 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 COX7A1P24310 79 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 LTC4SQ16873 150 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 ZNF260Q3ZCT1 412 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 C6orf183Q5T699 404 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 GPR157Q5UAW9 335 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 NCR3LG1Q68D85 454 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 HEPN1Q6WQI6 88 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 BRD3OSQ6XYD6 125 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 PNKDQ8N490 385 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 ARL11Q969Q4 196 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 S100A16Q96FQ6 103 aaKnown RBP11.44□□□□□ -0.58
USF1-209ENST00000529476 DCUN1D5Q9BTE7 237 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 SUCNR1Q9BXA5 334 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 RIMS4Q9H426 269 aaPredicted RBP11.44□□□□□ -0.58
USF1-209ENST00000529476 HEXA-AS1Q9H8Q6 139 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 LINC00574Q9H8X3 128 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 C12orf4Q9NQ89 552 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 DIABLOQ9NR28 239 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 MBNL3Q9NUK0 354 aaKnown RBP11.44□□□□□ -0.58
USF1-209ENST00000529476 NDUFA13Q9P0J0 144 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 SOX21Q9Y651 276 aaPredicted RBP11.44□□□□□ -0.58
USF1-209ENST00000529476 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
USF1-209ENST00000529476 TRBV6-6A0A0A6YYG2 114 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 A0A0A6YYH2 397 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 FAM172BPA6NC97 362 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 TMEM235A6NFC5 223 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 A6NJ64 397 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 SERPINE3A8MV23 424 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 ORC5O43913 435 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 APOA1P02647 267 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 GSTP1P09211 210 aaKnown RBP11.43□□□□□ -0.58
USF1-209ENST00000529476 ELK1P19419 428 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 ARFRP1Q13795 201 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 ARL6IP1Q15041 203 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 UTF1Q5T230 341 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 ZNF880Q6PDB4 577 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 C22orf15Q8WYQ4 148 aa11.43□□□□□ -0.58
USF1-209ENST00000529476 DGCR14Q96DF8 476 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms