RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 OR13C5Q8NGS8 318 aa10.3□□□□□ -0.76
CPSF1-204ENST00000529288 CHPT1Q8WUD6 406 aa10.3□□□□□ -0.76
CPSF1-204ENST00000529288 DPF1Q92782 380 aa10.3□□□□□ -0.76
CPSF1-204ENST00000529288 NCOR1P1Q9H4R4 102 aa10.3□□□□□ -0.76
CPSF1-204ENST00000529288 FGF20Q9NP95 211 aaPredicted RBP10.3□□□□□ -0.76
CPSF1-204ENST00000529288 TMEM138Q9NPI0 162 aa10.3□□□□□ -0.76
CPSF1-204ENST00000529288 MRPS18AQ9NVS2 196 aaKnown RBP10.3□□□□□ -0.76
CPSF1-204ENST00000529288 SIRT4Q9Y6E7 314 aaPredicted RBP10.3□□□□□ -0.76
CPSF1-204ENST00000529288 WI2-2373I1.2A0A1W2PRP0 233 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 GAPDHP04406 335 aaKnown RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 MYL12AP19105 171 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 GZMHP20718 246 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 RBM11P57052 281 aaKnown RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 RPL23AP62750 156 aaKnown RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 SLC35B1P78383 322 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 ADARB1P78563 741 aaKnown RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 SLC22A6Q4U2R8 563 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 OGFRL1Q5TC84 451 aaPredicted RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 FAM53AQ6NSI3 398 aaPredicted RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 ASCL4Q6XD76 172 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 FOXRED2Q8IWF2 684 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 MRPL41Q8IXM3 137 aaKnown RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 PACRGLQ8N7B6 248 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 ZFP41Q8N8Y5 198 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 OR10A7Q8NGE5 316 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 CHCHD3Q9NX63 227 aaKnown RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 BABAM2Q9NXR7 383 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 NKX1-2Q9UD57 310 aaPredicted RBP10.29□□□□□ -0.76
CPSF1-204ENST00000529288 ZNF281Q9Y2X9 895 aa10.29□□□□□ -0.76
CPSF1-204ENST00000529288 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 A0A1W2PP11 408 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 A0A1W2PPK0 400 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 DUS4LO95620 317 aaKnown RBP10.28□□□□□ -0.76
CPSF1-204ENST00000529288 DCKP27707 260 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 RIPK1Q13546 671 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 CCDC58Q4VC31 144 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 SLC16A12Q6ZSM3 486 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 OR2W3Q7Z3T1 314 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 PRR18Q8N4B5 295 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 STX19Q8N4C7 294 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 Q8NFD4 153 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 CYGBQ8WWM9 190 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 ZNF184Q99676 751 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-204ENST00000529288 LINC00574Q9H8X3 128 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 PAK1IP1Q9NWT1 392 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-204ENST00000529288 CLEC2DQ9UHP7 191 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 TRAPPC2LQ9UL33 140 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 DSCAML1Q8TD84 2053 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 DNAH3Q8TD57 4116 aa10.28□□□□□ -0.76
CPSF1-204ENST00000529288 PNMA8CA0A1B0GUJ8 204 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 IRGMA1A4Y4 181 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 LINC01548A6NM66 108 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 AIPO00170 330 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 FGF16O43320 207 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 GTF2F2P13984 249 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 IL3RAP26951 378 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 THBS3P49746 956 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 ETV3LQ6ZN32 361 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 JAGN1Q8N5M9 183 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 OR10V1Q8NGI7 309 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 OR4K15Q8NH41 348 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 GHSRQ92847 366 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 MUL1Q969V5 352 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 RBMXL1Q96E39 390 aaKnown RBP10.27□□□□□ -0.77
CPSF1-204ENST00000529288 EAF1Q96JC9 268 aaPredicted RBP10.27□□□□□ -0.77
CPSF1-204ENST00000529288 GPR61Q9BZJ8 451 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 C8orf4Q9NR00 106 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 GFOD1Q9NXC2 390 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 IL36GQ9NZH8 169 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 CKLFQ9UBR5 152 aa10.27□□□□□ -0.77
CPSF1-204ENST00000529288 EXOSC1Q9Y3B2 195 aaKnown RBP10.27□□□□□ -0.77
CPSF1-204ENST00000529288 NOTCH3Q9UM47 2321 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 MCRIP1C9JLW8 97 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 C15orf65H3BRN8 121 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 OGG1O15527 345 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 ZNF780AO75290 641 aaPredicted RBP10.26□□□□□ -0.77
CPSF1-204ENST00000529288 LALBAP00709 142 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 MT-ND4P03905 459 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 GNAO1P09471 354 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 MYCNOSP40205 109 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 ZNF816Q0VGE8 651 aaPredicted RBP10.26□□□□□ -0.77
CPSF1-204ENST00000529288 MED21Q13503 144 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 MPV17LQ2QL34 196 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 KIAA2026Q5HYC2 2103 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 VAX1Q5SQQ9 334 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 LAIR2Q6ISS4 152 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 GLIPR1L1Q6UWM5 242 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 UNQ9370/PRO34162Q6UXP9 181 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 LCNL1Q6ZST4 164 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 LINC00596Q86U02 117 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 STPG2Q8N412 459 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 NRG4Q8WWG1 115 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 SMIM19Q96E16 107 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 TMEM80Q96HE8 168 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 RASL11BQ9BPW5 248 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 BANF2Q9H503 90 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms