RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 RAD51DO75771 328 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 SERF1AO75920 110 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 NRASP01111 189 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 KRASP01116 189 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 IFNA5P01569 189 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 CATP04040 527 aaKnown RBP5.02□□□□□ -1.61
CD44-225ENST00000527326 GPX1P07203 203 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 CD55P08174 381 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 POU2F2P09086 479 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 MMP9P14780 707 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 UCP1P25874 307 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 IL3RAP26951 378 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 DUSP1P28562 367 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 SSTR5P35346 364 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 P2RY2P41231 377 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 GNG4P50150 75 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ATP5IP56385 69 aaPredicted RBP5.02□□□□□ -1.61
CD44-225ENST00000527326 TAS2R46P59540 309 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ARF3P61204 181 aaPredicted RBP5.02□□□□□ -1.61
CD44-225ENST00000527326 RPL23P62829 140 aaKnown RBP5.02□□□□□ -1.61
CD44-225ENST00000527326 SEC11AP67812 179 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 RUNX1Q01196 453 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 GNMTQ14749 295 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 CD226Q15762 336 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 PCK2Q16822 640 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 C1orf100Q5SVJ3 147 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 BVES-AS1Q5T3Y7 98 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 SLC18B1Q6NT16 456 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 TMEM184AQ6ZMB5 413 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 FA2HQ7L5A8 372 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ZNF550Q7Z398 422 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 LHFPL1Q86WI0 220 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 BAGE3Q86Y29 109 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 BAGE2Q86Y30 109 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 TMEM86AQ8N2M4 240 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 CADM4Q8NFZ8 388 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 OR10V1Q8NGI7 309 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 OR6N2Q8NGY6 317 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 RNF133Q8WVZ7 376 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 MBD3L1Q8WWY6 194 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ABHD14BQ96IU4 210 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 HARBI1Q96MB7 349 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 AP1S3Q96PC3 154 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ADOQ96SZ5 270 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 SMIM7Q9BQ49 75 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 DERL1Q9BUN8 251 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 LRRC61Q9BV99 259 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 HINT2Q9BX68 163 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 GTSF1LQ9H1H1 148 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 METTL7AQ9H8H3 244 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ZDHHC11Q9H8X9 412 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 CALHM2Q9HA72 323 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ST20Q9HBF5 79 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 BPIFA1Q9NP55 256 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 YAE1D1Q9NRH1 226 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 MRPL16Q9NX20 251 aaKnown RBP5.02□□□□□ -1.61
CD44-225ENST00000527326 CLDND1Q9NY35 253 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 LRIT1Q9P2V4 623 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 GNG13Q9P2W3 67 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 TRAPPC2LQ9UL33 140 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 MED31Q9Y3C7 131 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 CUL9Q8IWT3 2517 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 SCN1AP35498 2009 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 KIF26AQ9ULI4 1882 aaPredicted RBP5.01□□□□□ -1.61
CD44-225ENST00000527326 TRBV9A0A0B4J1U6 114 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 GAGE12HA6NDE8 117 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 A6NDN8 102 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 P2RY10O00398 339 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 ST8SIA3O43173 380 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 S1PR2O95136 353 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 MPZL1O95297 269 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 CGAP01215 116 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 HLA-DRB1P01911 266 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 KLK1P06870 262 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 CD3EP07766 207 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 SRFP11831 508 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 LAMP2P13473 410 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 IL11P20809 199 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 F2RP25116 425 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 CCR2P41597 374 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 FLT3LGP49771 235 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 EWSR1Q01844 656 aaKnown RBP eCLIP5.01□□□□□ -1.61
CD44-225ENST00000527326 FMODQ06828 376 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 FOXL1Q12952 345 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 TMEM177Q53S58 311 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 FFAR4Q5NUL3 377 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 C1QL3Q5VWW1 255 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 WBP2NLQ6ICG8 309 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 INO80CQ6PI98 192 aaPredicted RBP5.01□□□□□ -1.61
CD44-225ENST00000527326 ZNF562Q6V9R5 426 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 SP8Q8IXZ3 490 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 TMEM123Q8N131 208 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 FBXL14Q8N1E6 418 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 OR2I1PQ8NGU4 316 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 OR5H2Q8NGV7 314 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 DOK4Q8TEW6 326 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 RLN3Q8WXF3 142 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 EID2BQ96D98 161 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 KCNS1Q96KK3 526 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 Q96M85 177 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms