RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 PXT1Q8NFP0 134 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 MUC7Q8TAX7 377 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 PELI1Q96FA3 418 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 GABARAPL3Q9BY60 117 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 RIBC2Q9H4K1 309 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 FAM118AQ9NWS6 357 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 OAZ3Q9UMX2 235 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 HUWE1Q7Z6Z7 4374 aaKnown RBP12.6□□□□□ -0.39
PTPRU-210ENST00000527027 TRAV39A0A0B4J263 110 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 J3QLW9 94 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 IGHG4P01861 327 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 ZNF19P17023 458 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 GZMHP20718 246 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 CD1BP29016 333 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 PARP16Q8N5Y8 322 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 LINC00311Q8N616 119 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 C4orf3Q8WVX3 66 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 TRUB1Q8WWH5 349 aaKnown RBP12.59□□□□□ -0.39
PTPRU-210ENST00000527027 RNFT2Q96EX2 444 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 RDH12Q96NR8 316 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 RASL11BQ9BPW5 248 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 SMAD5-AS1Q9Y6J3 95 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 DNAH7Q8WXX0 4024 aa12.59□□□□□ -0.39
PTPRU-210ENST00000527027 SAC3D1A6NKF1 404 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 RPSAP08865 295 aaKnown RBP12.58□□□□□ -0.4
PTPRU-210ENST00000527027 INSL3P51460 131 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 ALDH3A2P51648 485 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 CFHR3Q02985 330 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 FHL3Q13643 280 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 ACBD7Q8N6N7 88 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 TMEM104Q8NE00 496 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 Q8NFD4 153 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 OR8H1Q8NGG4 311 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 OR52M1Q8NGK5 317 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 RTN4IP1Q8WWV3 396 aaPredicted RBP12.58□□□□□ -0.4
PTPRU-210ENST00000527027 CPNE2Q96FN4 548 aaPredicted RBP12.58□□□□□ -0.4
PTPRU-210ENST00000527027 C4orf36Q96KX1 117 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 S1PR3Q99500 378 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 RYR2Q92736 4967 aa12.58□□□□□ -0.4
PTPRU-210ENST00000527027 MOSP00540 346 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 VDAC1P21796 283 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 RSU1Q15404 277 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 PIGYQ3MUY2 71 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 SLC25A30Q5SVS4 291 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 SUMF2Q8NBJ7 301 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 OR11H1Q8NG94 326 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 OR10K1Q8NGX5 313 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 ST6GALNAC6Q969X2 333 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 GPER1Q99527 375 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 DPCDQ9BVM2 203 aaPredicted RBP12.57□□□□□ -0.4
PTPRU-210ENST00000527027 IMPAD1Q9NX62 359 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 SACSQ9NZJ4 4579 aa12.57□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF736B4DX44 427 aaPredicted RBP12.56□□□□□ -0.4
PTPRU-210ENST00000527027 GABRPO00591 440 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 MAGEB3O15480 346 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 LY86O95711 162 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 IGF1P05019 195 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 IL3RAP26951 378 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 PSMB8P28062 276 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 SOX6P35712 828 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 OGFRL1Q5TC84 451 aaPredicted RBP12.56□□□□□ -0.4
PTPRU-210ENST00000527027 LPCAT4Q643R3 524 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 SATL1Q86VE3 508 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 CBR4Q8N4T8 237 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 ARL11Q969Q4 196 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 MRPL48Q96GC5 212 aaKnown RBP12.56□□□□□ -0.4
PTPRU-210ENST00000527027 KCTD7Q96MP8 289 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 RCHY1Q96PM5 261 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 IFT22Q9H7X7 185 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 DHDHQ9UQ10 334 aa12.56□□□□□ -0.4
PTPRU-210ENST00000527027 EXOGQ9Y2C4 368 aaKnown RBP12.56□□□□□ -0.4
PTPRU-210ENST00000527027 TMEM212A6NML5 194 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 C15orf65H3BRN8 121 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 SDCBPO00560 298 aaPredicted RBP12.55□□□□□ -0.4
PTPRU-210ENST00000527027 EI24O14681 340 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 HTR3BO95264 441 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 ALPLP05186 524 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 RAB3AP20336 220 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 F2RL1P55085 397 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 SNRPGP62308 76 aaKnown RBP12.55□□□□□ -0.4
PTPRU-210ENST00000527027 MEDAGQ5VYS4 303 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 FAM71E2Q8N5Q1 922 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 OR1N2Q8NGR9 330 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 MYOZ3Q8TDC0 251 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
PTPRU-210ENST00000527027 CHCHD6Q9BRQ6 235 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 GFOD1Q9NXC2 390 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF580Q9UK33 172 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 ST3GAL6Q9Y274 331 aa12.55□□□□□ -0.4
PTPRU-210ENST00000527027 TMEM30CPA0ZSE6 113 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 ORC5O43913 435 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 OR7C1O76099 320 aaPredicted RBP12.54□□□□□ -0.4
PTPRU-210ENST00000527027 OR8U8P0C7N1 319 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms