RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 NAAAQ02083 359 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 TRIP6Q15654 476 aaKnown RBP8.28□□□□□ -1.08
CTNND1-213ENST00000526357 TP53I13Q8NBR0 393 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-213ENST00000526357 RNF122Q9H9V4 155 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 CCL28Q9NRJ3 127 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 KDM3BQ7LBC6 1761 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 KCNE1BA0A087WTH5 132 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 C7orf77A4D0Y5 90 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 J3QR06 171 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 PITX3O75364 302 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 ADAP1O75689 374 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 TSPAN13O95857 204 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 CRHP06850 196 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 SFTPCP11686 197 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 SELENOPP49908 381 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 ERVFRD-1P60508 538 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 MMDQ15546 238 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 FAM109BQ6ICB4 259 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-213ENST00000526357 TMEM183AQ8IXX5 376 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 TMEM70Q9BUB7 260 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 NRXN3Q9Y4C0 1643 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 PPYP01298 95 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 HOXC4P09017 264 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-213ENST00000526357 DAOP14920 347 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 RPS20P60866 119 aaKnown RBP8.28□□□□□ -1.08
CTNND1-213ENST00000526357 ARL6IP6Q8N6S5 226 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 RAX2Q96IS3 184 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 MARVELD1Q9BSK0 173 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 ZNF71Q9NQZ8 489 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-213ENST00000526357 TREM2Q9NZC2 230 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 RPL36A-HNRNPH2H7BZ11 118 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 J3QT63 122 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 C21orf62-AS1Q17RA5 79 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 IGSF11Q5DX21 431 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 FOXB2Q5VYV0 432 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 C12orf54Q6X4T0 127 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 TMEM171Q8WVE6 324 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 ISOC2Q96AB3 205 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 SCNM1Q9BWG6 230 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 N4BP2Q86UW6 1770 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-213ENST00000526357 CDS2O95674 445 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 MEIG1Q5JSS6 88 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 CT55Q8WUE5 264 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 NTMQ9P121 344 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 CLN8Q9UBY8 286 aa8.28□□□□□ -1.08
CTNND1-213ENST00000526357 RGPD8O14715 1765 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-213ENST00000526357 TMEM50BP56557 158 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 RPS4XP62701 263 aaKnown RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 LAMTOR1Q6IAA8 161 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 LOXHD1Q8IVV2 1947 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 A0A1W2PQD3 144 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 LAMB4A4D0S4 1761 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 LINC01565O15544 149 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 TNFSF14O43557 240 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 AGFG2O95081 481 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 EML2O95834 649 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 MT-ND6P03923 174 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 CKS2P33552 79 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 SPATA45Q537H7 98 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 TSPO2Q5TGU0 170 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 OR4A5Q8NH83 315 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 VSTM2LQ96N03 204 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 GPR35Q9HC97 309 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 SLC25A10Q9UBX3 287 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 COL16A1Q07092 1604 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 IGHV1OR21-1A0A087WYE8 117 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 CDIPTO14735 213 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 PPM1DO15297 605 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 PATE4P0C8F1 98 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 CDX1P47902 265 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 PSG9Q00887 426 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 PLPPR5Q32ZL2 321 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 TMEM136Q6ZRR5 245 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 LSM10Q969L4 123 aaKnown RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 OR2H1Q9GZK4 316 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 RCC2Q9P258 522 aaKnown RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 MICAL3Q7RTP6 2002 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 A0A0B4J293 547 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 IGHV5-51A0A0C4DH38 117 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 MPZL1O95297 269 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 UBE2V2Q15819 145 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 PMCHL1Q16048 86 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 TEX30Q5JUR7 227 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 INO80CQ6PI98 192 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 ABHD14BQ96IU4 210 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 MEGF10Q96KG7 1140 aa8.27□□□□□ -1.09
CTNND1-213ENST00000526357 TMEFF2Q9UIK5 374 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-213ENST00000526357 HPRT1P00492 218 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 FAM106CPP0CH98 169 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 SPINK14Q6IE38 97 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 NUBPLQ8TB37 319 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 APOBEC4Q8WW27 367 aaKnown RBP8.26□□□□□ -1.09
CTNND1-213ENST00000526357 GALNT14Q96FL9 552 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 GPA33Q99795 319 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 TNFRSF12AQ9NP84 129 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 WNT16Q9UBV4 365 aa8.26□□□□□ -1.09
CTNND1-213ENST00000526357 SF3B6Q9Y3B4 125 aaKnown RBP8.26□□□□□ -1.09
CTNND1-213ENST00000526357 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms