RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 FOXI3A8MTJ6 420 aaPredicted RBP10.58□□□□□ -0.72
SMPD1-202ENST00000526280 RNASEK-C17orf49H0YIS7 233 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 SOCS1O15524 211 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 TMEM127O75204 238 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 IGHV1-69P01742 117 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 MT-ND4P03905 459 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 CGB3P0DN86 165 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 CGB7P0DN87 165 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 FPR2P25090 351 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 BCAP31P51572 246 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 TMEM50BP56557 158 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 PRB3Q04118 309 aaPredicted RBP10.58□□□□□ -0.72
SMPD1-202ENST00000526280 TUSC1Q2TAM9 212 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 NKAPLQ5M9Q1 402 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 HCP5Q6MZN7 132 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 C9orf139Q6ZV77 190 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 C6orf201Q7Z4U5 140 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 ZNF554Q86TJ5 538 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 GAPTQ8N292 157 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 OR56B1Q8NGI3 324 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 OR13A1Q8NGR1 328 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 CYYR1Q96J86 154 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 FAAP24Q9BTP7 215 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 GAL3ST2Q9H3Q3 398 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 HEXA-AS1Q9H8Q6 139 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 RHBDL2Q9NX52 303 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 CUBNO60494 3623 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 UBE2QL1A1L167 161 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 ZNF729A6NN14 1252 aaPredicted RBP10.57□□□□□ -0.72
SMPD1-202ENST00000526280 RGS5O15539 181 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 CA11O75493 328 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 IGHV1-8P0DP01 117 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 SNRPBP14678 240 aaKnown RBP10.57□□□□□ -0.72
SMPD1-202ENST00000526280 VEGFCP49767 419 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 UBE2E1P51965 193 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 SCAND1P57086 179 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 GUCA2AQ02747 115 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 KLRD1Q13241 179 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 FAM189A2Q15884 450 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 C17orf58Q2M2W7 97 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 IDNKQ5T6J7 187 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 RUSC1-AS1Q66K80 236 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 PDZD9Q8IXQ8 264 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
SMPD1-202ENST00000526280 C22orf15Q8WYQ4 148 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 AP3S1Q92572 193 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 DYRK2Q92630 601 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 SDHCQ99643 169 aaPredicted RBP10.57□□□□□ -0.72
SMPD1-202ENST00000526280 SULT4A1Q9BR01 284 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 CCDC32Q9BV29 185 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 MS4A7Q9GZW8 240 aaPredicted RBP10.57□□□□□ -0.72
SMPD1-202ENST00000526280 LINC00574Q9H8X3 128 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 PLEKHJ1Q9NW61 149 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 HSF4Q9ULV5 492 aa10.57□□□□□ -0.72
SMPD1-202ENST00000526280 TRAV39A0A0B4J263 110 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 KBTBD11-OT1A0A1B0GTJ5 212 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 METTL21EPA6NDL7 271 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 RAB27BO00194 218 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 MMP23AO75900 390 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 PAHP00439 452 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 IFNA2P01563 188 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 GZMHP20718 246 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 CDK2P24941 298 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 GLP1RP43220 463 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 PLAC9Q5JTB6 97 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 HEPN1Q6WQI6 88 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 ZNF782Q6ZMW2 699 aaPredicted RBP10.56□□□□□ -0.72
SMPD1-202ENST00000526280 Q6ZTK2 550 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 RTN4RL2Q86UN3 420 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 PRIMA1Q86XR5 153 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 POC5Q8NA72 575 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 LGALS14Q8TCE9 139 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 MRGPRDQ8TDS7 321 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 MIXL1Q9H2W2 232 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 SOX21Q9Y651 276 aaPredicted RBP10.56□□□□□ -0.72
SMPD1-202ENST00000526280 SESN1Q9Y6P5 492 aa10.56□□□□□ -0.72
SMPD1-202ENST00000526280 NPIPB11E5RHQ5 1161 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 DEFA1P59665 94 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 DEFA3P59666 94 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 MOGAT2Q3SYC2 334 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 PRAMEF5Q5TYX0 476 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 LAX1Q8IWV1 398 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 OR5H6Q8NGV6 325 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 OR10R2Q8NGX6 335 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 OR4K15Q8NH41 348 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 SLC6A7Q99884 636 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 PECRQ9BY49 303 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 TMEM133Q9H2Q1 129 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 ABRACLQ9P1F3 81 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 ETV7Q9Y603 341 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 V9GYH0 126 aa10.55□□□□□ -0.72
SMPD1-202ENST00000526280 A0A1W2PRD5 423 aa10.54□□□□□ -0.72
SMPD1-202ENST00000526280 A0A1W2PRF3 423 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms