RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 PNLIPRP3Q17RR3 467 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 RSBN1Q5VWQ0 802 aaPredicted RBP14.21□□□□□ -0.13
CCS-204ENST00000526066 CD276Q5ZPR3 534 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 ZNF497Q6ZNH5 498 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 PLPPR1Q8TBJ4 325 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 C15orf40Q8WUR7 153 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 RIMS4Q9H426 269 aaPredicted RBP14.21□□□□□ -0.13
CCS-204ENST00000526066 AUNIPQ9H7T9 357 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 ETAA1Q9NY74 926 aa14.21□□□□□ -0.13
CCS-204ENST00000526066 POLR3KQ9Y2Y1 108 aaPredicted RBP14.21□□□□□ -0.13
CCS-204ENST00000526066 TMEM30CPA0ZSE6 113 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 HLA-DQB1P01920 261 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 DEFA6Q01524 100 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 MEF2CQ06413 473 aaPredicted RBP14.2□□□□□ -0.14
CCS-204ENST00000526066 AESQ08117 197 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 KRBOX4Q5JUW0 171 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 HACD4Q5VWC8 232 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 TREML4Q6UXN2 200 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 CCDC190Q86UF4 302 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 RTN4RL2Q86UN3 420 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 FGFRL1Q8N441 504 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 SIGLECL1Q8N7X8 197 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 C8orf46Q8TAG6 207 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 DMRTB1Q96MA1 342 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 SOSTQ9BQB4 213 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 DCTN5Q9BTE1 182 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 AK3Q9UIJ7 227 aa14.2□□□□□ -0.14
CCS-204ENST00000526066 TRBV6-6A0A0A6YYG2 114 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 ODAMA1E959 279 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 NAPSAO96009 420 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 MT-ND4P03905 459 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 CD3GP09693 182 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 PRTN3P24158 256 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 ETV6P41212 452 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 PITPNAQ00169 270 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 EDDM3AQ14507 147 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 OLFML2AQ68BL7 652 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 BTN2A1Q7KYR7 527 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 IZUMO1Q8IYV9 350 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 CYYR1Q96J86 154 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 CMSS1Q9BQ75 279 aaKnown RBP14.19□□□□□ -0.14
CCS-204ENST00000526066 C12orf4Q9NQ89 552 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 RPUSD1Q9UJJ7 312 aaKnown RBP14.19□□□□□ -0.14
CCS-204ENST00000526066 PKD1L1Q8TDX9 2849 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 TGP01266 2768 aa14.19□□□□□ -0.14
CCS-204ENST00000526066 hADV38S2A0JD32 116 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 TMEM235A6NFC5 223 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 PTBP1P26599 531 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCS-204ENST00000526066 ZFP36P26651 326 aaKnown RBP14.18□□□□□ -0.14
CCS-204ENST00000526066 GLIPR1P48060 266 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 EDDM3BP56851 147 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 RPL31P62899 125 aaKnown RBP14.18□□□□□ -0.14
CCS-204ENST00000526066 MRPS15P82914 257 aaKnown RBP14.18□□□□□ -0.14
CCS-204ENST00000526066 BAMBIQ13145 260 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 ARFRP1Q13795 201 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 PYHIN1Q6K0P9 492 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 DTX3Q8N9I9 347 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 LY6G5BQ8NDX9 201 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 H1FXQ92522 213 aaKnown RBP14.18□□□□□ -0.14
CCS-204ENST00000526066 UNKLQ9H9P5 680 aaKnown RBP14.18□□□□□ -0.14
CCS-204ENST00000526066 OR6C3Q9NZP0 311 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 OPN4Q9UHM6 478 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 KIF25Q9UIL4 384 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 NUP50Q9UKX7 468 aa14.18□□□□□ -0.14
CCS-204ENST00000526066 MEIKINA0A087WXM9 373 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 PPIAL4CA0A0B4J2A2 164 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 FABP12A6NFH5 140 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 DNAJC9-AS1A6NH13 148 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 C22orf46C9J442 243 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 FSHBP01225 129 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 DTYMKP23919 212 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 GNG2P59768 71 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 PAX2Q02962 417 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 MIDNQ504T8 468 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 SPANXN2Q5MJ10 180 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 MRPL30Q8TCC3 161 aaKnown RBP14.17□□□□□ -0.14
CCS-204ENST00000526066 DYRK2Q92630 601 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 CORO2AQ92828 525 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 DACT3Q96B18 629 aaPredicted RBP14.17□□□□□ -0.14
CCS-204ENST00000526066 DUX5Q96PT3 197 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 SCPEP1Q9HB40 452 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 C19orf12Q9NSK7 152 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 ELF5Q9UKW6 265 aaPredicted RBP14.17□□□□□ -0.14
CCS-204ENST00000526066 MRPS7Q9Y2R9 242 aaKnown RBP14.17□□□□□ -0.14
CCS-204ENST00000526066 AUP1Q9Y679 476 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 V9GYH0 126 aa14.17□□□□□ -0.14
CCS-204ENST00000526066 TRGV10A0A0A0MS01 117 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 SULT1C2O00338 296 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 CTDSPLO15194 276 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 ENSAO43768 121 aaKnown RBP14.16□□□□□ -0.14
CCS-204ENST00000526066 LIPFP07098 398 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 PRSS3P35030 304 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 MRPS10P82664 201 aaKnown RBP14.16□□□□□ -0.14
CCS-204ENST00000526066 IL18Q14116 193 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 TMEM200BQ69YZ2 307 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 ZNF880Q6PDB4 577 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 MOB1BQ7L9L4 216 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 ZNF554Q86TJ5 538 aa14.16□□□□□ -0.14
CCS-204ENST00000526066 TPRX1Q8N7U7 411 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms