RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 CUL9Q8IWT3 2517 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 SERPINE3A8MV23 424 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 NPIPA5E9PKD4 350 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ANGPTL7O43827 346 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ZNF737O75373 536 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ZNF17P17021 662 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 SLC6A8P48029 635 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ZNF121P58317 390 aaPredicted RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 TAS2R30P59541 319 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 RPS21P63220 83 aaKnown RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 MRPS21P82921 87 aaKnown RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ZNF695Q8IW36 515 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ODF3L1Q8IXM7 274 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 H1FOOQ8IZA3 346 aaPredicted RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 PATE1Q8WXA2 126 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ATP5SQ99766 215 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 PLK3Q9H4B4 646 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 NPIPA1Q9UND3 350 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 SEC16AO15027 2179 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 A8MXE2 369 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 CDS2O95674 445 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 TDGF1P13385 188 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 PRSS12P56730 875 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 KLF3P57682 345 aaPredicted RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 CARD18P57730 90 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 KRTDAPP60985 99 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 C9orf40Q8IXQ3 194 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 OR4C5Q8NGB2 326 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 OR10G4Q8NGN3 311 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 PLPPR1Q8TBJ4 325 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 THAP3Q8WTV1 239 aaPredicted RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 RBM24Q9BX46 236 aaKnown RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 NXF5Q9H1B4 397 aaKnown RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ZNF286AQ9HBT8 521 aa9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 ARHGEF17Q96PE2 2063 aaPredicted RBP9.73□□□□□ -0.85
CLNS1A-204ENST00000525428 TRDCB7Z8K6 153 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 PLPP3O14495 311 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 TNFRSF10CO14798 259 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 IFNA5P01569 189 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 BMP5P22003 454 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 ECI1P42126 302 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 EXT1Q16394 746 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 Q6ZN92 141 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 HOXB13Q92826 284 aaPredicted RBP9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 TIMM29Q9BSF4 260 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 ZNF552Q9H707 407 aaPredicted RBP9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 NECAP2Q9NVZ3 263 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 EP300Q09472 2414 aaPredicted RBP9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 MED12Q93074 2177 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 LOC105371242A0A075B767 164 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 RER1O15258 196 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 PGCP20142 388 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 IL3RAP26951 378 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 MCEMP1Q8IX19 187 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 BATF2Q8N1L9 274 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 FAM89BQ8N5H3 189 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 GATAD1Q8WUU5 269 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 IMMP2LQ96T52 175 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 SAMD10Q9BYL1 202 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 KIR3DX1Q9H7L2 352 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 ZNF703Q9H7S9 590 aaPredicted RBP9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 C2orf72A6NCS6 295 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 OPN1LWP04000 364 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 IL12BP29460 328 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 GABREP78334 506 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 IZUMO4Q1ZYL8 232 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 CYP2G1PQ6ZSU1 146 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 ADPRHL1Q8NDY3 354 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 BMFQ96LC9 184 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 WWTR1Q9GZV5 400 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 PARLQ9H300 379 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 ASXL3Q9C0F0 2248 aa9.72□□□□□ -0.85
CLNS1A-204ENST00000525428 TMED7-TICAM2A0A0A6YYA0 188 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 C3orf85A0A1B0GTC6 90 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 E9PLN8 166 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 FAHP16930 419 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 EGR1P18146 543 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 FNDC7Q5VTL7 733 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 CARD17Q5XLA6 110 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 TEX43Q6ZNM6 134 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 CISD2Q8N5K1 135 aaKnown RBP9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 TSTD1Q8NFU3 115 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 OR4F5Q8NH21 305 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 FLVCR1-AS1Q8TAF5 88 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 SCGB1C1Q8TD33 95 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 LHX4Q969G2 390 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 APH1AQ96BI3 265 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 OR4F4Q96R69 305 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 RPH3ALQ9UNE2 315 aa9.71□□□□□ -0.85
CLNS1A-204ENST00000525428 CELSR3Q9NYQ7 3312 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 SEMA4FO95754 770 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 GP1BBP13224 206 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 GNRHRP30968 328 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 Q8NFD4 153 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 APOOQ9BUR5 198 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 PRTFDC1Q9NRG1 225 aa9.71□□□□□ -0.86
CLNS1A-204ENST00000525428 PNO1Q9NRX1 252 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms