RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 ZNF682O95780 498 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 CLIC3O95833 236 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 IFNA7P01567 189 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 CD8AP01732 235 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 APOC3P02656 99 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OPN1SWP03999 348 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 APODP05090 189 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TACSTD2P09758 323 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 SULT1A3P0DMM9 295 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 SULT1A4P0DMN0 295 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 FAM236CP0DP71 79 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 CPMP14384 443 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 RCC1P18754 421 aaPredicted RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 CXCL3P19876 107 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 PSMB1P20618 241 aaKnown RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 NTF3P20783 257 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 HTR1DP28221 377 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 LOXP28300 417 aaPredicted RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 CD34P28906 385 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 S100A2P29034 98 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TNFSF9P41273 254 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TFPI2P48307 235 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 KLK7P49862 253 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 SSR4P51571 173 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 UBE2E1P51965 193 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 S100A10P60903 97 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 SELENOWP63302 87 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 RHOGP84095 191 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TGFBR3Q03167 851 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 RUNX3Q13761 415 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ATXN7L3Q14CW9 347 aaPredicted RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 HERPUD1Q15011 391 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 PAFAH1B3Q15102 231 aaKnown RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 RAB35Q15286 201 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR1C1Q15619 314 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 NRF1Q16656 503 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 MESTQ5EB52 335 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 NHLRC3Q5JS37 347 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 FHL5Q5TD97 284 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 GLYATQ6IB77 296 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR4C11Q6IEV9 310 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 WDR59Q6PJI9 974 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ARL9Q6T311 187 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 HRCT1Q6UXD1 115 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TMEM64Q6YI46 380 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TMEM184AQ6ZMB5 413 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 FAM231DQ6ZW35 169 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 FA2HQ7L5A8 372 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ARPINQ7Z6K5 226 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OAFQ86UD1 273 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR4N5Q8IXE1 308 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 FAM24BQ8N5W8 94 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TCEANCQ8N8B7 351 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 PRELID2Q8N945 189 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ZNF439Q8NDP4 499 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR8G5Q8NG78 346 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR52L1Q8NGH7 329 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR10G7Q8NGN6 311 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR10D4PQ8NGN7 298 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR13C8Q8NGS7 320 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR51Q1Q8NH59 317 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 C8orf46Q8TAG6 207 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 CD99L2Q8TCZ2 262 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 SLC37A2Q8TED4 501 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ZNF418Q8TF45 676 aaPredicted RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 OR5P3Q8WZ94 311 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ARL11Q969Q4 196 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 GPR146Q96CH1 333 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ISOC1Q96CN7 298 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 DDIT4LQ96D03 193 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 MRPS24Q96EL2 167 aaKnown RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 GALNT14Q96FL9 552 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 ZC2HC1AQ96GY0 325 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 PGLYRP3Q96LB9 341 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 UBE2E2Q96LR5 201 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 SCGB3A2Q96PL1 93 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 RNF157Q96PX1 679 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 MGLLQ99685 303 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 APOL4Q9BPW4 351 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 LXNQ9BS40 222 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 OR2J1Q9GZK6 312 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 VSIRQ9H7M9 311 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 EFCAB1Q9HAE3 211 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 SLC25A19Q9HC21 320 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 POLD4Q9HCU8 107 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 RBFOX1Q9NWB1 397 aaKnown RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 TAS2R16Q9NYV7 291 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 KLK11Q9UBX7 282 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 NAT8BQ9UHF3 227 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 BTRCQ9Y297 605 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 NTNG1Q9Y2I2 539 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 CARHSP1Q9Y2V2 147 aaKnown RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 RPL36Q9Y3U8 105 aaKnown RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 KLF12Q9Y4X4 402 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 LSM5Q9Y4Y9 91 aaKnown RBP1.83□□□□□ -2.12
CD44-216ENST00000525293 ABCC12Q96J65 1359 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 TNS3Q68CZ2 1445 aa1.83□□□□□ -2.12
CD44-216ENST00000525293 GRIN2AQ12879 1464 aa1.82□□□□□ -2.12
CD44-216ENST00000525293 TOP2AP11388 1531 aaKnown RBP1.82□□□□□ -2.12
CD44-216ENST00000525293 PRDM15P57071 1507 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms