RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ESM1Q9NQ30 184 aa3.75□□□□□ -1.81
CHMP4A-202ENST00000524955 TMEM160Q9NX00 188 aa3.75□□□□□ -1.81
CHMP4A-202ENST00000524955 RHBDL2Q9NX52 303 aa3.75□□□□□ -1.81
CHMP4A-202ENST00000524955 GHRLQ9UBU3 117 aa3.75□□□□□ -1.81
CHMP4A-202ENST00000524955 HILPDAQ9Y5L2 63 aa3.75□□□□□ -1.81
CHMP4A-202ENST00000524955 ABCA2Q9BZC7 2435 aa3.75□□□□□ -1.81
CHMP4A-202ENST00000524955 ARHGAP32A7KAX9 2087 aa3.75□□□□□ -1.81
CHMP4A-202ENST00000524955 FLNAP21333 2647 aaKnown RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 CREBBPQ92793 2442 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF469Q96JG9 3925 aaPredicted RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ZANQ9Y493 2812 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 IGHV2-26A0A0B4J1V2 119 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 A0A1W2PPH5 198 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FUOMA2VDF0 154 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 DPPA5A6NC42 116 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A10PA6NDY2 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A18PA6NE21 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A16PA6NEW6 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 DNAJC9-AS1A6NH13 148 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A20PA6NIJ5 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A8PA6NJQ4 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A7PA6NKC0 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF729A6NN14 1252 aaPredicted RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A22PA8MWA6 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A12PA8MX19 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A5PA8MXJ8 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A23PA8MXZ1 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM25AB3EWG3 89 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM25CB3EWG5 89 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM25GB3EWG6 89 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 C15orf65H3BRN8 121 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 J3QRK9 145 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 MFNGO00587 321 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 CTDSP2O14595 271 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 RGS5O15539 181 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 HOXA3O43365 443 aaPredicted RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SSX5O60225 188 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 IGHV4-59P01825 116 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 HBZP02008 142 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 CSN2P05814 226 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SCTP09683 121 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A15PP0C7V4 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A13PP0C7W8 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A14PP0C7W9 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM90A24PP0C7X0 464 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 CGB3P0DN86 165 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 CGB7P0DN87 165 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 HIST1H1DP16402 221 aaKnown RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ZNF182P17025 639 aaPredicted RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ELK1P19419 428 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 RAB6AP20340 208 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 PRTN3P24158 256 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FPR2P25090 351 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 PPP1CCP36873 323 aaKnown RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 REG1BP48304 166 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 RORCP51449 518 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ARFRP1Q13795 201 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SSX2Q16385 188 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 LY6EQ16553 131 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FBLN7Q53RD9 439 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FOXB2Q5VYV0 432 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 USP43Q70EL4 1123 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 LINC00596Q86U02 117 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SNX29P2Q8IUI4 249 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 GVQW1Q8N7I0 195 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 CORO2AQ92828 525 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ZDHHC16Q969W1 377 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 PHF21AQ96BD5 680 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 AJUBAQ96IF1 538 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ST6GALNAC5Q9BVH7 336 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 RBM38Q9H0Z9 239 aaKnown RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 TMEM133Q9H2Q1 129 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 GAL3ST2Q9H3Q3 398 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 HEXA-AS1Q9H8Q6 139 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SEBOXQ9HB31 216 aaPredicted RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SPACA1Q9HBV2 294 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 TAS2R3Q9NYW6 316 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 IDI2-AS1Q9NZ38 188 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 OR6C3Q9NZP0 311 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 OR1A1Q9P1Q5 309 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FBLN5Q9UBX5 448 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 LPAR3Q9UBY5 353 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SPATA2Q9UM82 520 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 PSG11Q9UQ72 335 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 MRPS7Q9Y2R9 242 aaKnown RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 UBE2J1Q9Y385 318 aaPredicted RBP3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 FAM96BQ9Y3D0 163 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 SESN1Q9Y6P5 492 aa3.74□□□□□ -1.81
CHMP4A-202ENST00000524955 ACANP16112 2415 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 F8P00451 2351 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 IGHV3-72A0A0B4J1Y9 119 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 IGKV1-6A0A0C4DH72 117 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 hCG_1809904A0A1W2PP81 198 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 A0A1W2PPE2 198 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 A0A1W2PR64 198 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 A0A1W2PRV1 198 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 METTL21EPA6NDL7 271 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 SH2D7A6NKC9 451 aaPredicted RBP3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 NPIPB11E5RHQ5 1161 aa3.73□□□□□ -1.81
CHMP4A-202ENST00000524955 TOR1AO14656 332 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms