RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 HEPN1Q6WQI6 88 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-223ENST00000524033 MRGPRGQ86SM5 289 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 ODF3L1Q8IXM7 274 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 LGI3Q8N145 548 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 LINC00469Q8N7U9 141 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 WDSUB1Q8N9V3 476 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 TMEM178AQ8NBL3 297 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 MDS2Q8NDY4 140 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 GJC3Q8NFK1 279 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 OR10G3Q8NGC4 313 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 OR5L2Q8NGL0 311 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 THAP3Q8WTV1 239 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-223ENST00000524033 NPRL2Q8WTW4 380 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 PIGTQ969N2 578 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 BOD1Q96IK1 185 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 HES7Q9BYE0 225 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 METTL9Q9H1A3 318 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 SLC35B3Q9H1N7 401 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 ZNF701Q9NV72 531 aaPredicted RBP6.7□□□□□ -1.34
SPIDR-223ENST00000524033 NECAP2Q9NVZ3 263 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 KLRF1Q9NZS2 232 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 LRFN1Q9P244 771 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 SH3BGRL2Q9UJC5 107 aa6.7□□□□□ -1.34
SPIDR-223ENST00000524033 MED13Q9UHV7 2174 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 A0A087WZY1 265 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 IGKV1-12A0A0C4DH73 117 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 A0A1W2PPE2 198 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 TRDCB7Z8K6 153 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 RPL36A-HNRNPH2H7BZ11 118 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 M0R135 149 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 XRCC2O43543 280 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 NEURL1O76050 574 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 ZFAND5O76080 213 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 CDS2O95674 445 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 IGKV1D-12P01611 117 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 S100A9P06702 114 aaKnown RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 SRP19P09132 144 aaKnown RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 CBR1P16152 277 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 S100PP25815 95 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 HTR5AP47898 357 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 CYB561P49447 251 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 CLDN17P56750 224 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 MRPS34P82930 218 aaKnown RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 EWSR1Q01844 656 aaKnown RBP eCLIP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 RAB35Q15286 201 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 SNAI3Q3KNW1 292 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 DNLZQ5SXM8 178 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 Q6ZS49 121 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 GALNTL5Q7Z4T8 443 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 LYZL2Q7Z4W2 148 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 FOXRED2Q8IWF2 684 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 MCEMP1Q8IX19 187 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 ZNF808Q8N4W9 903 aaPredicted RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 OR52M1Q8NGK5 317 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 SLC22A8Q8TCC7 542 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 ITLN2Q8WWU7 325 aaPredicted RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 RTN4IP1Q8WWV3 396 aaPredicted RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 ISOC2Q96AB3 205 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 INTS12Q96CB8 462 aaKnown RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 SPACA9Q96E40 222 aaPredicted RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 ZNF799Q96GE5 643 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 PBDC1Q9BVG4 233 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 DEFB126Q9BYW3 111 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 SH3BGRL3Q9H299 93 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 TMPRSS5Q9H3S3 457 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 NIT2Q9NQR4 276 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 SLC2A9Q9NRM0 540 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 GPR173Q9NS66 373 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 PLEKHJ1Q9NW61 149 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 MYOTQ9UBF9 498 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 PIGLQ9Y2B2 252 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 NOSIPQ9Y314 301 aaKnown RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 TMED3Q9Y3Q3 217 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 CHCHD2Q9Y6H1 151 aaPredicted RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 ABCA12Q86UK0 2595 aa6.69□□□□□ -1.34
SPIDR-223ENST00000524033 SPTBN1Q01082 2364 aaKnown RBP6.69□□□□□ -1.34
SPIDR-223ENST00000524033 DUXBA0A1W2PPF3 345 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 IGSF23A1L1A6 192 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 BTBD17A6NE02 478 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 IFITM10A6NMD0 228 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 ZNF732B4DXR9 585 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 HSD17B6O14756 317 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 ST8SIA3O43173 380 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 GATCO43716 136 aaKnown RBP6.68□□□□□ -1.34
SPIDR-223ENST00000524033 SYNGR3O43761 229 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 SCGB1D2O95969 90 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 S100A6P06703 90 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 MMP9P14780 707 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 DAOP14920 347 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 ZNF14P17017 642 aaPredicted RBP6.68□□□□□ -1.34
SPIDR-223ENST00000524033 GABRR1P24046 479 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 FHITP49789 147 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 MLF1P58340 268 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 SRPXP78539 464 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 RNPS1Q15287 305 aaKnown RBP6.68□□□□□ -1.34
SPIDR-223ENST00000524033 CNN3Q15417 329 aaKnown RBP6.68□□□□□ -1.34
SPIDR-223ENST00000524033 C3AR1Q16581 482 aa6.68□□□□□ -1.34
SPIDR-223ENST00000524033 SRSF7Q16629 238 aaKnown RBP eCLIP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms