RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 DMRTC1Q5HYR2 192 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 DNM1P34Q6PK57 102 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 CADM4Q8NFZ8 388 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 GPR146Q96CH1 333 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 SPACA7Q96KW9 195 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 RYDENQ9NUL5 291 aaKnown RBP7.24□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF319Q9P2F9 582 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 RNF150Q9ULK6 438 aa7.24□□□□□ -1.25
CSMD1-213ENST00000523488 TET1Q8NFU7 2136 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 TGFBR3LH3BV60 316 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 OR3A4PP47883 348 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 KRTDAPP60985 99 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 UBE2V1Q13404 147 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 BAGE2Q86Y30 109 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF695Q8IW36 515 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 APH1AQ96BI3 265 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 HSPB9Q9BQS6 159 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 TMEM106BQ9NUM4 274 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 LILRA1O75019 489 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 OR2J2O76002 312 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 MPLP40238 635 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 NSDHLQ15738 373 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 VWC2Q2TAL6 325 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 SPIN3Q5JUX0 258 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 PRSS57Q6UWY2 283 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 Q6ZPA2 131 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 TMEM256Q8N2U0 113 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 CCDC71LQ8N9Z2 235 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 OR10G6Q8NH81 332 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 OR5P3Q8WZ94 311 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 BADQ92934 168 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 SPSB1Q96BD6 273 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 BET1LQ9NYM9 111 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 DEC1Q9P2X7 70 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 BRCA2P51587 3418 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 NXPH3O95157 252 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF205O95201 554 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 IL33O95760 270 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 ARF6P62330 175 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 TMEM252Q8N6L7 170 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 OR51E1Q8TCB6 317 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 THAP3Q8WTV1 239 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-213ENST00000523488 ASB10Q8WXI3 467 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 NUDT11Q96G61 164 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 Q96M66 194 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 CCDC3Q9BQI4 270 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 WIPI2Q9Y4P8 454 aa7.23□□□□□ -1.25
CSMD1-213ENST00000523488 LOC101059948A0A1B0GTJ6 334 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 GNRHRP30968 328 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 OTX1P32242 354 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 LHX2P50458 406 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 UBE2G2P60604 165 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 SRPXP78539 464 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 FAM78BQ5VT40 261 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 FAM57BQ71RH2 274 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 MRGPRGQ86SM5 289 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 FAM103A1Q9BTL3 118 aaKnown RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 MRPL13Q9BYD1 178 aaKnown RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 SLC39A9Q9NUM3 307 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 ST3GAL6Q9Y274 331 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 MKI67P46013 3256 aaKnown RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 TRAV36DV7A0A075B6V5 113 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 IGKV1-9A0A0C4DH69 117 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 NBEAP1P0C6P0 100 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 OPRM1P35372 400 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 SLC6A8P48029 635 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 TM4SF4P48230 202 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 HINT1P49773 126 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 PSG3Q16557 428 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 Q6ZWC4 215 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 BCORP1Q8N888 145 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF321PQ8N8H1 164 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 ATP5SQ99766 215 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 PBOV1Q9GZY1 135 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 ZDHHC11Q9H8X9 412 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 MANBALQ9NQG1 85 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 SMPXQ9UHP9 88 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 CCL26Q9Y258 94 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 HEBP2Q9Y5Z4 205 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 IGKV1D-8A0A087WSZ0 117 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 PLPP3O14495 311 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 RAMP3O60896 148 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 AADACP22760 399 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 ARF3P61204 181 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 RPL23P62829 140 aaKnown RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 ARF1P84077 181 aaKnown RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 RTP5Q14D33 572 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 TDRG1Q3Y452 100 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 SLC38A9Q8NBW4 561 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 OR5AU1Q8NGC0 362 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 LHX4Q969G2 390 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 PHPT1Q9NRX4 125 aaPredicted RBP7.22□□□□□ -1.25
CSMD1-213ENST00000523488 HSPB7Q9UBY9 170 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 UQCR10Q9UDW1 63 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 LAMTOR2Q9Y2Q5 125 aa7.22□□□□□ -1.25
CSMD1-213ENST00000523488 RP1P56715 2156 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 TNFRSF10CO14798 259 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 LINC00271P0C7V0 271 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms