RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CHST4Q8NCG5 386 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 OR10H4Q8NGA5 316 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 OR10K1Q8NGX5 313 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 MYOZ3Q8TDC0 251 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 ABHD5Q8WTS1 349 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 MS4A10Q96PG2 267 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 IL4I1Q96RQ9 567 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 CHCHD6Q9BRQ6 235 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 SLC25A19Q9HC21 320 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 ZNF581Q9P0T4 197 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 HERC2O95714 4834 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 TRAV24A0A0B4J272 114 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 A0A1W2PQL4 384 aaPredicted RBP8.94□□□□□ -0.98
SDCBP-211ENST00000523441 IGF1P05019 195 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 FSTP19883 344 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 CD1BP29016 333 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 PPIFP30405 207 aaKnown RBP8.94□□□□□ -0.98
SDCBP-211ENST00000523441 CRISP1P54107 249 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 RUNX1Q01196 453 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 PMS2P11Q13670 270 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 LYPD6Q86Y78 171 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 TMEM104Q8NE00 496 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 OR10V1Q8NGI7 309 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 OR13C3Q8NGS6 347 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 IL17DQ8TAD2 202 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 CNIH3Q8TBE1 160 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 LINC00476Q8WZB0 136 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 ARL11Q969Q4 196 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 LRGUKQ96M69 825 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 ELOVL1Q9BW60 279 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 TOLLIPQ9H0E2 274 aa8.94□□□□□ -0.98
SDCBP-211ENST00000523441 NPIPB11E5RHQ5 1161 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 HSPA12AO43301 675 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 BRI3O95415 125 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 IGLV1-40P01703 118 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 UBCP0CG48 685 aaKnown RBP8.93□□□□□ -0.98
SDCBP-211ENST00000523441 RAP2AP10114 183 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 ATP6V1E1P36543 226 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 MS4A2Q01362 244 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 PIGYQ3MUY2 71 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 RSBN1Q5VWQ0 802 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-211ENST00000523441 FAM220AQ7Z4H9 259 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 PRR18Q8N4B5 295 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 NEK7Q8TDX7 302 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 SPSB1Q96BD6 273 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 CCDC124Q96CT7 223 aaKnown RBP8.93□□□□□ -0.98
SDCBP-211ENST00000523441 RITA1Q96K30 269 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 MBOAT4Q96T53 435 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 FAM192AQ9GZU8 254 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 PLEKHA3Q9HB20 300 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 TAGLN3Q9UI15 199 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 STUB1Q9UNE7 303 aa8.93□□□□□ -0.98
SDCBP-211ENST00000523441 LGALS1P09382 135 aaKnown RBP8.92□□□□□ -0.98
SDCBP-211ENST00000523441 PTGES3Q15185 160 aaKnown RBP8.92□□□□□ -0.98
SDCBP-211ENST00000523441 SATL1Q86VE3 508 aa8.92□□□□□ -0.98
SDCBP-211ENST00000523441 OR8H1Q8NGG4 311 aa8.92□□□□□ -0.98
SDCBP-211ENST00000523441 OR51A4Q8NGJ6 313 aa8.92□□□□□ -0.98
SDCBP-211ENST00000523441 RNF166Q96A37 237 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-211ENST00000523441 MNTQ99583 582 aa8.92□□□□□ -0.98
SDCBP-211ENST00000523441 ANKRD60Q9BZ19 345 aa8.92□□□□□ -0.98
SDCBP-211ENST00000523441 MRPS28Q9Y2Q9 187 aaKnown RBP8.92□□□□□ -0.98
SDCBP-211ENST00000523441 FBXO7Q9Y3I1 522 aa8.92□□□□□ -0.98
SDCBP-211ENST00000523441 PCLOQ9Y6V0 5065 aa8.92□□□□□ -0.98
SDCBP-211ENST00000523441 IGHV7-81A0A0B4J1V7 117 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 ANKRD34BA5PLL1 514 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 SOX15O60248 233 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 HTR3BO95264 441 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 IGLV1-51P01701 117 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 CSTBP04080 98 aaKnown RBP8.91□□□□□ -0.98
SDCBP-211ENST00000523441 ANXA8P13928 327 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 MTNR1BP49286 362 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 TPPP2P59282 170 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 ACTBP60709 375 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 LRRC36Q1X8D7 754 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 TMEM244Q5VVB8 128 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 UTS2BQ765I0 119 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 RPP25LQ8N5L8 163 aaKnown RBP8.91□□□□□ -0.98
SDCBP-211ENST00000523441 SUMF2Q8NBJ7 301 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 CCDC54Q8NEL0 328 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 TMEM163Q8TC26 289 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 C10orf35Q96D05 121 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 GPER1Q99527 375 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 ZNF251Q9BRH9 671 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 DPCDQ9BVM2 203 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-211ENST00000523441 ARGLU1Q9NWB6 273 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-211ENST00000523441 GFOD1Q9NXC2 390 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 NDE1Q9NXR1 346 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 GNG12Q9UBI6 72 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 DNAH10Q8IVF4 4471 aa8.91□□□□□ -0.98
SDCBP-211ENST00000523441 CXorf65A6NEN9 183 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 A8MZ25 164 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 B2RBV5 119 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 MITFO75030 526 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-211ENST00000523441 HSPB1P04792 205 aaKnown RBP8.9□□□□□ -0.98
SDCBP-211ENST00000523441 MNAT1P51948 309 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 NDPQ00604 133 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 TRIM25Q14258 630 aaKnown RBP8.9□□□□□ -0.98
SDCBP-211ENST00000523441 GALEQ14376 348 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 PLGLAQ15195 96 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms