RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 LIN7CQ9NUP9 197 aaKnown RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 SMPD3Q9NY59 655 aaPredicted RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 BLOC1S6Q9UL45 172 aa7.4□□□□□ -1.22
SDC2-207ENST00000522911 EXOGQ9Y2C4 368 aaKnown RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 SIRT4Q9Y6E7 314 aaPredicted RBP7.4□□□□□ -1.22
SDC2-207ENST00000522911 KIAA2026Q5HYC2 2103 aa7.4□□□□□ -1.23
SDC2-207ENST00000522911 DAPL1A0PJW8 107 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 FAM172BPA6NC97 362 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 SH2D7A6NKC9 451 aaPredicted RBP7.39□□□□□ -1.23
SDC2-207ENST00000522911 TMEM212A6NML5 194 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 SERPINE3A8MV23 424 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 H3BSH0 61 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 CCL24O00175 119 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 ELANEP08246 267 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 OCM2P0CE71 109 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 OCMP0CE72 109 aaPredicted RBP7.39□□□□□ -1.23
SDC2-207ENST00000522911 VSIG8P0DPA2 414 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 TMEM11P17152 192 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 GZMHP20718 246 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 RANBP1P43487 201 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 ZNF137PP52743 207 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 TMBIM6P55061 237 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 CFHR3Q02985 330 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 FHL3Q13643 280 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 GALEQ14376 348 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 RBM39Q14498 530 aaKnown RBP7.39□□□□□ -1.23
SDC2-207ENST00000522911 ATXN7L3Q14CW9 347 aaPredicted RBP7.39□□□□□ -1.23
SDC2-207ENST00000522911 PNLIPRP3Q17RR3 467 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 C9orf152Q5JTZ5 239 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 RBM48Q5RL73 367 aaKnown RBP7.39□□□□□ -1.23
SDC2-207ENST00000522911 ZNF691Q5VV52 312 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 TTC23Q5W5X9 447 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 C8orf86Q6ZUL3 223 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 RNF144BQ7Z419 303 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 LINC00596Q86U02 117 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 CBR4Q8N4T8 237 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 DRAM1Q8N682 238 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 TMEM104Q8NE00 496 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 OR13A1Q8NGR1 328 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 OR13C3Q8NGS6 347 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 OR10AC1Q8NH08 325 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 OR8U1Q8NH10 309 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 ST6GALNAC6Q969X2 333 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 RFT1Q96AA3 541 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 NOL4LQ96MY1 436 aaPredicted RBP7.39□□□□□ -1.23
SDC2-207ENST00000522911 SLC29A1Q99808 456 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 ZNF649Q9BS31 505 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 CHCHD3Q9NX63 227 aaKnown RBP7.39□□□□□ -1.23
SDC2-207ENST00000522911 IL36GQ9NZH8 169 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 KIF25Q9UIL4 384 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 OAZ3Q9UMX2 235 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 GMPPBQ9Y5P6 360 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 SACSQ9NZJ4 4579 aa7.39□□□□□ -1.23
SDC2-207ENST00000522911 MEIKINA0A087WXM9 373 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 IGHV1-3A0A0C4DH29 117 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 SAC3D1A6NKF1 404 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 SNTNA6NMZ2 147 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 C3orf84H3BNL1 204 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 TXNL1O43396 289 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 MPZL2O60487 215 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 IGHG4P01861 327 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 GAPDHP04406 335 aaKnown RBP7.38□□□□□ -1.23
SDC2-207ENST00000522911 ALPLP05186 524 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 TMEM225BP0DP42 221 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 CALCBP10092 127 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 NFYBP25208 207 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 DCKP27707 260 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 CD1BP29016 333 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 GLP1RP43220 463 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 INSL3P51460 131 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 SNU13P55769 128 aaKnown RBP7.38□□□□□ -1.23
SDC2-207ENST00000522911 TMEM30BQ3MIR4 351 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 PAN3Q58A45 887 aaKnown RBP7.38□□□□□ -1.23
SDC2-207ENST00000522911 NKAPLQ5M9Q1 402 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 C9orf66Q5T8R8 295 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 LINC00299Q6ZSB3 139 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 CLVS1Q8IUQ0 354 aaPredicted RBP7.38□□□□□ -1.23
SDC2-207ENST00000522911 KLHL30-AS1Q8NEE0 82 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 ZNF555Q8NEP9 628 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 OR5D18Q8NGL1 313 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 OR5M8Q8NGP6 311 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 MYOZ3Q8TDC0 251 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 ISOC1Q96CN7 298 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 RAX2Q96IS3 184 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 EAF1Q96JC9 268 aaPredicted RBP7.38□□□□□ -1.23
SDC2-207ENST00000522911 SPACA5Q96QH8 159 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 BCL7BQ9BQE9 202 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 PLSCR3Q9NRY6 295 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 IMPAD1Q9NX62 359 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 U3KQK5 164 aa7.38□□□□□ -1.23
SDC2-207ENST00000522911 NUDT19A8MXV4 375 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 HSD17B6O14756 317 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 ORC5O43913 435 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 IGKV1D-33P01593 117 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 IGKV1-33P01594 117 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 IGF1P05019 195 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 CCDC159P0C7I6 412 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 CHATP28329 748 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 GPR12P47775 334 aa7.37□□□□□ -1.23
SDC2-207ENST00000522911 ALDH3A2P51648 485 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms