RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 GLAP06280 429 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 NFYBP25208 207 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 PRRX1P54821 245 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 FABP5Q01469 135 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 RBM39Q14498 530 aaKnown RBP13.22□□□□□ -0.29
PABPC1-221ENST00000522720 PLA1AQ53H76 456 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 RAB12Q6IQ22 244 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 ZNF497Q6ZNH5 498 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 LIAT1Q6ZQX7 453 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 OR10A7Q8NGE5 316 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 RFESDQ8TAC1 157 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 NEK7Q8TDX7 302 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 WFDC12Q8WWY7 111 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 ABCB10Q9NRK6 738 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 IDI2-AS1Q9NZ38 188 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 RNF114Q9Y508 228 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 PEX16Q9Y5Y5 336 aa13.22□□□□□ -0.29
PABPC1-221ENST00000522720 LEUTXA8MZ59 168 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 SLC22A1O15245 554 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 VSIG8P0DPA2 414 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 FUT3P21217 361 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 HTR2CP28335 458 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 PROK1P58294 105 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 SSX1Q16384 188 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 HLA-DRB5Q30154 266 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 UTF1Q5T230 341 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 SIGIRRQ6IA17 410 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 OR9G1Q8NH87 305 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 FAM46BQ96A09 425 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 CREB3L1Q96BA8 519 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 TCF19Q9Y242 345 aa13.21□□□□□ -0.29
PABPC1-221ENST00000522720 A6NDX4 124 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 C15orf65H3BRN8 121 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 BUB1B-PAK6H3BSN5 160 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 MPIG6BO95866 241 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 JUNBP17275 347 aaPredicted RBP13.2□□□□□ -0.3
PABPC1-221ENST00000522720 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
PABPC1-221ENST00000522720 SSTR5P35346 364 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 CEACAM3P40198 252 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 RPL5P46777 297 aaKnown RBP13.2□□□□□ -0.3
PABPC1-221ENST00000522720 QRFPP83859 136 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 OR10K2Q6IF99 312 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 CCBE1Q6UXH8 406 aaPredicted RBP13.2□□□□□ -0.3
PABPC1-221ENST00000522720 SLC16A12Q6ZSM3 486 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 GAPTQ8N292 157 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 OR6M1Q8NGM8 313 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 KCNG3Q8TAE7 436 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 CCDC107Q8WV48 283 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 GFI1Q99684 422 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 ETAA1Q9NY74 926 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 FBLN5Q9UBX5 448 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 PITPNC1Q9UKF7 332 aa13.2□□□□□ -0.3
PABPC1-221ENST00000522720 LY6LH3BQJ8 138 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 J3QR06 171 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 AIPO00170 330 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 ORC5O43913 435 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 CHST1O43916 411 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 PDCD6O75340 191 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 CA11O75493 328 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 BPNT1O95861 308 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 KIR2DS4P43632 304 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 LTC4SQ16873 150 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 UBE2UQ5VVX9 321 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 CD200R1LQ6Q8B3 271 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 LEAP2Q969E1 77 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 MMP28Q9H239 520 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 RANBP3Q9H6Z4 567 aaPredicted RBP13.19□□□□□ -0.3
PABPC1-221ENST00000522720 NDUFB11Q9NX14 153 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 PSG11Q9UQ72 335 aa13.19□□□□□ -0.3
PABPC1-221ENST00000522720 AK6Q9Y3D8 172 aaKnown RBP13.19□□□□□ -0.3
PABPC1-221ENST00000522720 MGAM2Q2M2H8 2515 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 TMEM14DPA8MWL7 114 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 F2RL2O00254 374 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 SLC17A2O00624 439 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 PSMD7P51665 324 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 RPS27AP62979 156 aaKnown RBP13.18□□□□□ -0.3
PABPC1-221ENST00000522720 SRSF4Q08170 494 aaKnown RBP13.18□□□□□ -0.3
PABPC1-221ENST00000522720 UNC119Q13432 240 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 TPTE2P1Q5T6R2 138 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 SYT6Q5T7P8 510 aaPredicted RBP13.18□□□□□ -0.3
PABPC1-221ENST00000522720 DTX3Q8N9I9 347 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 OR52M1Q8NGK5 317 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 OR4C13Q8NGP0 309 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 ARL11Q969Q4 196 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 TM2D1Q9BX74 207 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 TMEM59Q9BXS4 323 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 PLGRKTQ9HBL7 147 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 TRAPPC2LQ9UL33 140 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 PKD1L1Q8TDX9 2849 aa13.18□□□□□ -0.3
PABPC1-221ENST00000522720 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 OOSP1A8MZH6 123 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 IGHV3-7P01780 117 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 GALP22466 123 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 CHATP28329 748 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 BRS3P32247 399 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 CCDC144NLQ6NUI1 221 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 TMEM219Q86XT9 240 aa13.17□□□□□ -0.3
PABPC1-221ENST00000522720 OR4K15Q8NH41 348 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms