RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PITPNAQ00169 270 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 CDK5Q00535 292 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 UBE2V2Q15819 145 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 TMEM244Q5VVB8 128 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 TMEM236Q5W0B7 351 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 OVCH2Q7RTZ1 564 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 SGPP2Q8IWX5 399 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 OR10H4Q8NGA5 316 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 OR5D18Q8NGL1 313 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 OR13C3Q8NGS6 347 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 NEK7Q8TDX7 302 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 CORO2AQ92828 525 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 EME1Q96AY2 570 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 NR1H4Q96RI1 486 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-220ENST00000522658 MYCBPQ99417 103 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-220ENST00000522658 GPER1Q99527 375 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 SEBOXQ9HB31 216 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-220ENST00000522658 HMG20AQ9NP66 347 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 LIN7CQ9NUP9 197 aaKnown RBP4.88□□□□□ -1.63
PABPC1-220ENST00000522658 HHLA2Q9UM44 414 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 ERGIC3Q9Y282 383 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 TENM3Q9P273 2699 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 RYR3Q15413 4870 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 IGKV1-27A0A075B6S5 117 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 IGHV3-72A0A0B4J1Y9 119 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 A0A1W2PPI3 338 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 CCDC182A6NF36 153 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 F8VVB4 439 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 F8VWA3 439 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 OVOL1O14753 267 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 APOL3O95236 402 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 MOSP00540 346 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 FRMD6-AS1P0C7T7 363 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 TMEM225BP0DP42 221 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 GP9P14770 177 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ATF1P18846 271 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 CD40LGP29965 261 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 REG1BP48304 166 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 KCNJ3P48549 501 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 CRISP1P54107 249 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ZP1P60852 638 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 PDZK1IP1Q13113 114 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 TRIM25Q14258 630 aaKnown RBP4.87□□□□□ -1.63
PABPC1-220ENST00000522658 NXNL2Q5VZ03 156 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 SPATA24Q86W54 205 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 CATSPERDQ86XM0 798 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 IZUMO1Q8IYV9 350 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 STX19Q8N4C7 294 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 OR8H1Q8NGG4 311 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 MRGPRDQ8TDS7 321 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ABHD5Q8WTS1 349 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 LEAP2Q969E1 77 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ST6GALNAC6Q969X2 333 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ASB9Q96DX5 294 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 OR5B12Q96R08 314 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 OR4C12Q96R67 309 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 S100A13Q99584 98 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ABCG5Q9H222 651 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 PPIL3Q9H2H8 161 aaKnown RBP4.87□□□□□ -1.63
PABPC1-220ENST00000522658 MED4Q9NPJ6 270 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 KIAA1456Q9P272 454 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 MRM2Q9UI43 246 aaKnown RBP4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ZNF107Q9UII5 783 aaPredicted RBP4.87□□□□□ -1.63
PABPC1-220ENST00000522658 KIF25Q9UIL4 384 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 VSIG4Q9Y279 399 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 MRPS28Q9Y2Q9 187 aaKnown RBP4.87□□□□□ -1.63
PABPC1-220ENST00000522658 ARL2BPQ9Y2Y0 163 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 COL7A1Q02388 2944 aa4.87□□□□□ -1.63
PABPC1-220ENST00000522658 A0A087X0M5 115 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 IGHV1-3A0A0C4DH29 117 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 A0A1B0GTI1 187 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 A0A1B0GX30 115 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A18PA6NE21 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A16PA6NEW6 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A20PA6NIJ5 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A9PA6NNJ1 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A12PA8MX19 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A5PA8MXJ8 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 PRR32B1ATL7 298 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 SLC33A1O00400 549 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-220ENST00000522658 SDCBPO00560 298 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-220ENST00000522658 LDLRAD4O15165 306 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 MAGEB4O15481 346 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-220ENST00000522658 SLC25A17O43808 307 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 PRKYO43930 277 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 SNX3O60493 162 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 SRSF10O75494 262 aaKnown RBP4.86□□□□□ -1.63
PABPC1-220ENST00000522658 SULT1C4O75897 302 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 KDM4BO94953 1096 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 HTR1AP08908 422 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 OR8U9P0C7N5 309 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 OR2T7P0C7T2 308 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A15PP0C7V4 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A13PP0C7W8 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A14PP0C7W9 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 FAM90A24PP0C7X0 464 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 SLC2A2P11168 524 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-220ENST00000522658 GYPEP15421 78 aa4.86□□□□□ -1.63
PABPC1-220ENST00000522658 MTNR1BP49286 362 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms