RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CXXC4Q9H2H0 198 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 NAT8Q9UHE5 227 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 GPR132Q9UNW8 380 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
SYNPO-205ENST00000522122 J3QT63 122 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 CDIPTO14735 213 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 GNG10P50151 68 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 EGR4Q05215 589 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 TMEM230Q96A57 120 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 IER2Q9BTL4 223 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 G6PC2Q9NQR9 355 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 HIST1H3AP68431 136 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 TOMM20LQ6UXN7 152 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 FBXO17Q96EF6 278 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 KCNK17Q96T54 332 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 NDFIP1Q9BT67 221 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 SLC26A1Q9H2B4 701 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 OR2W1Q9Y3N9 320 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 C9orf152Q5JTZ5 239 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 NCMAPQ5T1S8 102 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 KCNAB3O43448 404 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 MUC1P15941 1255 aaPredicted RBP12.05□□□□□ -0.48
SYNPO-205ENST00000522122 OR5D13Q8NGL4 314 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 DYRK2Q92630 601 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 OR6C3Q9NZP0 311 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 SCN8AQ9UQD0 1980 aa12.05□□□□□ -0.48
SYNPO-205ENST00000522122 A0A0J9YW62 118 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 SERTM2A0A1B0GWG4 89 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 B4DEV8 164 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 PAX5Q02548 391 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 OR2T10Q8NGZ9 312 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 DUSP15Q9H1R2 295 aaPredicted RBP12.04□□□□□ -0.48
SYNPO-205ENST00000522122 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 RTTNQ86VV8 2226 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 TRAV14DV4A0A0A6YYC5 116 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 RPL36A-HNRNPH2H7BZ11 118 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 CA11O75493 328 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 SULT1A2P50226 295 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 DLK1P80370 383 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 MS4A10Q96PG2 267 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 AQP10Q96PS8 301 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 VAMP8Q9BV40 100 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 OR5AC2Q9NZP5 309 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 A0A1W2PNV4 684 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 MYPOPQ86VE0 399 aaPredicted RBP12.04□□□□□ -0.48
SYNPO-205ENST00000522122 C1orf210Q8IVY1 113 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 GPR87Q9BY21 358 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 SMOC1Q9H4F8 434 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 Q9N2K0 584 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 PRSS50Q9UI38 385 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 RCC1P18754 421 aaPredicted RBP12.04□□□□□ -0.48
SYNPO-205ENST00000522122 PMCHP20382 165 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 PMELP40967 661 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 MAGEA5P43359 124 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 IL36GQ9NZH8 169 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 TIMM9Q9Y5J7 89 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 PLXNA2O75051 1894 aa12.04□□□□□ -0.48
SYNPO-205ENST00000522122 A0A1B0GU03 582 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 FCGR3AP08637 254 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 KIR2DS2P43631 304 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 GNG4P50150 75 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 FAM78BQ5VT40 261 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 MOB3BQ86TA1 216 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 FKBP11Q9NYL4 201 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 ASXL3Q9C0F0 2248 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 TRGV8A0A0C4DH27 118 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 H3BQ15 152 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 IGHV3-13P01766 116 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 IGHV3-7P01780 117 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 GAPDHP04406 335 aaKnown RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 PAX6P26367 422 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 OPRK1P41145 380 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 PMS2P11Q13670 270 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 DHRS7BQ6IAN0 325 aaPredicted RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 ADIPOR1Q96A54 375 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 SH2D2AQ9NP31 389 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 OOEPA6NGQ2 149 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 DNASE2O00115 360 aaPredicted RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 FCN1O00602 326 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 ACTL6AO96019 429 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 F12P00748 615 aaPredicted RBP12.03□□□□□ -0.48
SYNPO-205ENST00000522122 BMP5P22003 454 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 OR4S2Q8NH73 311 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 R3HDM4Q96D70 268 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 REG4Q9BYZ8 158 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 GLRX2Q9NS18 164 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 FAM206AQ9NX38 181 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 TINAGQ9UJW2 476 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 SCN2AQ99250 2005 aa12.03□□□□□ -0.48
SYNPO-205ENST00000522122 SPINK4O60575 86 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms