RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TAAR3PQ9P1P4 343 aa2.3□□□□□ -2.04
HDAC2-208ENST00000520746 ALPK2Q86TB3 2170 aa2.3□□□□□ -2.04
HDAC2-208ENST00000520746 MED12Q93074 2177 aa2.3□□□□□ -2.04
HDAC2-208ENST00000520746 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.29□□□□□ -2.042e-7■■■■■ 29.8
HDAC2-208ENST00000520746 HEATR5AQ86XA9 2040 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 IGHV2OR16-5A0A0B4J2B6 119 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 EXOC1LA0A1B0GW35 172 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 TMEM72A0PK05 275 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 CLDN25C9JDP6 229 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 RAD51CO43502 376 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 FCMRO60667 390 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 SNNO75324 88 aaPredicted RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 UPK3AO75631 287 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 AHSA1O95433 338 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 PSMG1O95456 288 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 HLA-HP01893 362 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 OR12D1P0DN82 309 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 NQO1P15559 274 aaKnown RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 NCK1P16333 377 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 IL12AP29459 219 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 BTCP35070 178 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 CCR6P51684 374 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 KLF3P57682 345 aaPredicted RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 GLO1Q04760 184 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 FGL1Q08830 312 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 BNIP2Q12982 314 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 SKP2Q13309 424 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 CEACAM16Q2WEN9 425 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 TTMPQ5BVD1 217 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 SAXO2Q658L1 398 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 TNFAIP8L2Q6P589 184 aaPredicted RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 C16orf87Q6PH81 154 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 GRINAQ7Z429 371 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 MDP1Q86V88 176 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 LRP11Q86VZ4 500 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 NATD1Q8N6N6 113 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 ZDHHC22Q8N966 263 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 FNDC5Q8NAU1 212 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 OR51G1Q8NGK1 321 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 OR4A15Q8NGL6 344 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 OR6X1Q8NH79 312 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 SYNPRQ8TBG9 265 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 MARCH1Q8TCQ1 289 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 AGR3Q8TD06 166 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 YIPF5Q969M3 257 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 SLC35G5Q96KT7 338 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 OXGR1Q96P68 337 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 CCT7Q99832 543 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 HDHD3Q9BSH5 251 aaPredicted RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 C1orf50Q9BV19 199 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 MRPL37Q9BZE1 423 aaKnown RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 OR51I1Q9H343 314 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 ARMC7Q9H6L4 198 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF442Q9H7R0 627 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 YY1AP1Q9H869 796 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 NOX3Q9HBY0 568 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 PDP1Q9P0J1 537 aaPredicted RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 NUP50Q9UKX7 468 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 RAB26Q9ULW5 256 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 PYCARDQ9ULZ3 195 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 SLC35A3Q9Y2D2 325 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 V9GYY5 206 aaPredicted RBP2.29□□□□□ -2.04
HDAC2-208ENST00000520746 VPS13CQ709C8 3753 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 MED12LQ86YW9 2145 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 NACAE9PAV3 2078 aa2.29□□□□□ -2.04
HDAC2-208ENST00000520746 ARPC4-TTLL3A0A0A6YYG9 625 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 SMIM23A6NLE4 172 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 CLDN24A6NM45 220 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 H3BQF6 201 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 AZIN1O14977 448 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 PIN1P1O15428 100 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 MAGEB4O15481 346 aaPredicted RBP2.28□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF208O43345 1280 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 ATP8B1O43520 1251 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 RAMP3O60896 148 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 ENTPD5O75356 428 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 FOXH1O75593 365 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 VAMP5O95183 116 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 FARS2O95363 451 aaKnown RBP2.28□□□□□ -2.04
HDAC2-208ENST00000520746 PTHP01270 115 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 IFI6P09912 130 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 GKN3PP0CG01 181 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 OR8G3PP0DMU2 310 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 NEFHP12036 1026 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 CCL2P13500 99 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 PRPS1L1P21108 318 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 GLRXP35754 106 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 GUCA1AP43080 201 aaPredicted RBP2.28□□□□□ -2.04
HDAC2-208ENST00000520746 CRYBB2P43320 205 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 RPS5P46782 204 aaKnown RBP2.28□□□□□ -2.04
HDAC2-208ENST00000520746 EVX1P49640 407 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 GBX2P52951 348 aaPredicted RBP2.28□□□□□ -2.04
HDAC2-208ENST00000520746 FOXA1P55317 472 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 NAA20P61599 178 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 SLC9A3R2Q15599 337 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF141Q15928 474 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 MAPK14Q16539 360 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 TAF9Q16594 264 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 ARHGAP11BQ3KRB8 267 aa2.28□□□□□ -2.04
HDAC2-208ENST00000520746 ATP6AP1LQ52LC2 224 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms