RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OR5H14A6NHG9 310 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2AG2A6NM03 316 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR52A4PA6NMU1 304 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 F5H5P2 479 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 M0QZK8 103 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 NDUFS8O00217 210 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 TP53I11O14683 189 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 FADS1O60427 444 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BKO60814 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 B4GALT2O60909 372 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CTNSO60931 367 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ALOX12BO75342 701 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MTX2O75431 263 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 EPPINO95925 133 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 F10P00742 488 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 TIMP1P01033 207 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 IFNA17P01571 189 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MBP02144 154 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 PPBPP02775 128 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPN2P04844 631 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 BCHEP06276 602 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BJP06899 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 IL3P08700 152 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 UCHL1P09936 223 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF735P0CB33 412 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RD3LP0DJH9 198 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 GZMBP10144 247 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CELP19835 753 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BOP23527 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 GABRR1P24046 479 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MMP11P24347 488 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 AGTR1P30556 359 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HTR1FP30939 366 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 IL2RGP31785 369 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BBP33778 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACVR1BP36896 505 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 IFNGR2P38484 337 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCR2P41597 374 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR1E2P47887 323 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 P2RX1P51575 399 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRKXP51817 358 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 AKR1C2P52895 323 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BDP58876 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2B8PP59922 312 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAP1BP61224 184 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 STXBP1P61764 594 aaKnown RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPS23P62266 143 aaKnown RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 TBPL1P62380 186 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BCP62807 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPS15P62841 145 aaKnown RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MRPS10P82664 201 aaKnown RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 PITPNAQ00169 270 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 REEP5Q00765 189 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 SPIBQ01892 262 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 AKR1C1Q04828 323 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 FUT7Q11130 342 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 FOXF1Q12946 379 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 TSPAN31Q12999 210 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 GINS1Q14691 196 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 TRAM1Q15629 374 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HMGN3Q15651 99 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 MAPK14Q16539 360 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 SYPL1Q16563 259 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST2H2BEQ16778 126 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HNRNPA1L2Q32P51 320 aaKnown RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 NDUFAF6Q330K2 333 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 UBE2NLQ5JXB2 153 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 NCMAPQ5T1S8 102 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 IDNKQ5T6J7 187 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RIPPLY2Q5TAB7 128 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 GLT8D1Q68CQ7 371 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 LPCAT3Q6P1A2 487 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 BTNL3Q6UXE8 466 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMPPEQ6ZT21 453 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACOT7LQ6ZUV0 252 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 LANCL3Q6ZV70 420 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC16A14Q7RTX9 510 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 BIVMQ86UB2 503 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF546Q86UE3 836 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 VRK2Q86Y07 508 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRR22Q8IZ63 422 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 KIR2DL5AQ8N109 375 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 RNF175Q8N4F7 328 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZFP41Q8N8Y5 198 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACOT4Q8N9L9 421 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 UBAC2Q8NBM4 344 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HSD17B11Q8NBQ5 300 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 NFAM1Q8NET5 270 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 VN1R2Q8NFZ6 395 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4K5Q8NGD3 323 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10AD1Q8NGE0 317 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10A7Q8NGE5 316 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR52B4Q8NGK2 314 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR1J4Q8NGS1 313 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5K2Q8NHB8 316 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 NUBPLQ8TB37 319 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 M1APQ8TC57 530 aa2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 SKA2Q8WVK7 121 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H2BHQ93079 126 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms