RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CLEC18AA5D8T8 446 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 CD8AP01732 235 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.46
CLN8-204ENST00000519254 LMO1P25800 156 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 MDH2P40926 338 aaKnown RBP12.15□□□□□ -0.46
CLN8-204ENST00000519254 KIR2DS4P43632 304 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 UCP3P55916 312 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 FXYD4P59646 89 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 KIR2DS1Q14954 304 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 SWI5Q1ZZU3 235 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 FIP1L1Q6UN15 594 aaKnown RBP12.15□□□□□ -0.46
CLN8-204ENST00000519254 CLEC18CQ8NCF0 446 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 VRK1Q99986 396 aaPredicted RBP12.15□□□□□ -0.46
CLN8-204ENST00000519254 OR14J1Q9UGF5 321 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 IL19Q9UHD0 177 aa12.15□□□□□ -0.46
CLN8-204ENST00000519254 CRYM-AS1A6NIL9 109 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 PSPNO60542 156 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 PPYP01298 95 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 COX6B1P14854 86 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 BOLLQ8N9W6 283 aaKnown RBP12.14□□□□□ -0.47
CLN8-204ENST00000519254 LRRC29Q8WV35 223 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 SEC22AQ96IW7 307 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 DIRC2Q96SL1 478 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 MS4A5Q9H3V2 200 aa12.14□□□□□ -0.47
CLN8-204ENST00000519254 PKDREJQ9NTG1 2253 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 TRAV14DV4A0A0A6YYC5 116 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 POM121CA8CG34 1229 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 BET1O15155 118 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 SOD3P08294 240 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 CFHR2P36980 270 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 PIGPP57054 158 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
CLN8-204ENST00000519254 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
CLN8-204ENST00000519254 RSRP1Q9BUV0 290 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 EGLN1Q9GZT9 426 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 SAP30LQ9HAJ7 183 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 CBLN4Q9NTU7 201 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 LAMP3Q9UQV4 416 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 DSCAMO60469 2012 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 TRAV39A0A0B4J263 110 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.13□□□□□ -0.47
CLN8-204ENST00000519254 TUSC2O75896 110 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 IFNA2P01563 188 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 TFF1P04155 84 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 TK1P04183 234 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 CTXN2P0C2S0 81 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 EGR1P18146 543 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 CXCL2P19875 107 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 SSTR2P30874 369 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 HERV-K104P61576 105 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 ATXN7L3Q14CW9 347 aaPredicted RBP12.13□□□□□ -0.47
CLN8-204ENST00000519254 SMIM21Q3B7S5 101 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 OR5T2Q8NGG2 359 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 OR4A4PQ8NGN8 299 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 OR10Z1Q8NGY1 313 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 COQ8AQ8NI60 647 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 HEXA-AS1Q9H8Q6 139 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 RASL12Q9NYN1 266 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 GLS2Q9UI32 602 aa12.13□□□□□ -0.47
CLN8-204ENST00000519254 ABCA4P78363 2273 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 DYSFO75923 2080 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 TEX13DA0A0J9YY54 714 aaPredicted RBP12.12□□□□□ -0.47
CLN8-204ENST00000519254 RFPL4AA6NLU0 287 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 HMSDA8MTL9 139 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 FAM25EA8MYX2 175 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 SRRM5B3KS81 715 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 RFPL4AL1F8VTS6 287 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 H7C1Q1 480 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 CD55P08174 381 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 ADH4P08319 380 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 TNFRSF1AP19438 455 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 COL8A1P27658 744 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 KCNJ3P48549 501 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 TESK1Q15569 626 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 FAM209AQ5JX71 171 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 SGPP2Q8IWX5 399 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 SLC38A6Q8IZM9 456 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 PDCD10Q9BUL8 212 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 RAB18Q9NP72 206 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 PPP1R3CQ9UQK1 317 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 WIPI2Q9Y4P8 454 aa12.12□□□□□ -0.47
CLN8-204ENST00000519254 IFNL4K9M1U5 179 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 ADAP1O75689 374 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 DANCRP0C864 163 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 GNRHRP30968 328 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 GATA4P43694 442 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 ABCA11PQ4W5N1 156 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 MOB1BQ7L9L4 216 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 OR11L1Q8NGX0 322 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 RTN4IP1Q8WWV3 396 aaPredicted RBP12.11□□□□□ -0.47
CLN8-204ENST00000519254 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 NAA60Q9H7X0 242 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 SLC2A9Q9NRM0 540 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 MBNL3Q9NUK0 354 aaKnown RBP12.11□□□□□ -0.47
CLN8-204ENST00000519254 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
CLN8-204ENST00000519254 PCDHB10Q9UN67 800 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms