RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FAM90A15PP0C7V4 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A13PP0C7W8 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A14PP0C7W9 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FAM90A24PP0C7X0 464 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 CDX1P47902 265 aaPredicted RBP15.69■□□□□ 0.1
SDC2-202ENST00000518385 TMEM211Q6ICI0 200 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 UNQ6494/PRO21346Q6UXR6 183 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 C1QL2Q7Z5L3 287 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 CPEB3Q8NE35 698 aaKnown RBP15.69■□□□□ 0.1
SDC2-202ENST00000518385 SARAFQ96BY9 339 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 MSI2Q96DH6 328 aaKnown RBP15.69■□□□□ 0.1
SDC2-202ENST00000518385 SMIM3Q9BZL3 60 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 LHX6Q9UPM6 363 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 CFAP47Q6ZTR5 3102 aa15.69■□□□□ 0.1
SDC2-202ENST00000518385 FRYQ5TBA9 3013 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 ZNF816-ZNF321PA0A0X1KG74 233 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 ZNF732B4DXR9 585 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 CLN5O75503 358 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 WISP2O76076 250 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 CNOT4O95628 575 aaKnown RBP15.68■□□□□ 0.1
SDC2-202ENST00000518385 OR5AC1P0C628 307 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 FUT6P51993 359 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 OR8G1Q15617 311 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 C3AR1Q16581 482 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 RBMS3Q6XE24 437 aaKnown RBP15.68■□□□□ 0.1
SDC2-202ENST00000518385 P4HA3Q7Z4N8 544 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 APOBEC3DQ96AK3 386 aaPredicted RBP15.68■□□□□ 0.1
SDC2-202ENST00000518385 PLEKHF2Q9H8W4 249 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 ELL3Q9HB65 397 aaPredicted RBP15.68■□□□□ 0.1
SDC2-202ENST00000518385 WFDC1Q9HC57 220 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 TREM2Q9NZC2 230 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 CLCF1Q9UBD9 225 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 TINAGQ9UJW2 476 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 SLC7A11Q9UPY5 501 aa15.68■□□□□ 0.1
SDC2-202ENST00000518385 DMXL2Q8TDJ6 3036 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 PPIHO43447 177 aaKnown RBP15.67■□□□□ 0.1
SDC2-202ENST00000518385 NRASP01111 189 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 S100A2P29034 98 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 HERV-K104P61576 105 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 MALLQ13021 153 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 AKIRIN2Q53H80 203 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 C6orf201Q7Z4U5 140 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 SLC35E3Q7Z769 313 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 FAM24BQ8N5W8 94 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 OR2AE1Q8NHA4 323 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 CD300LFQ8TDQ1 290 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 MUCL1Q96DR8 90 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 BOD1Q96IK1 185 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 C11orf1Q9H5F2 150 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 SLC2A9Q9NRM0 540 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 PTPRQQ9UMZ3 2332 aa15.67■□□□□ 0.1
SDC2-202ENST00000518385 IGKV1D-8A0A087WSZ0 117 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 CLEC18AA5D8T8 446 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 RBFOX3A6NFN3 312 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 SEC14L6B5MCN3 397 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 GABRR1P24046 479 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 RBP2P50120 134 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 MTCP1P56278 107 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 RPS23P62266 143 aaKnown RBP15.66■□□□□ 0.1
SDC2-202ENST00000518385 EWSR1Q01844 656 aaKnown RBP eCLIP15.66■□□□□ 0.1
SDC2-202ENST00000518385 ZNF92Q03936 586 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 ADAM5Q6NVV9 412 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 OR2C3Q8N628 320 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 CLEC18CQ8NCF0 446 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 OR1K1Q8NGR3 316 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 BCL2L2Q92843 193 aaPredicted RBP15.66■□□□□ 0.1
SDC2-202ENST00000518385 IL22RA2Q969J5 263 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 PIGTQ969N2 578 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 GPR173Q9NS66 373 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 AK3Q9UIJ7 227 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 A0A096LPE4 126 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 A0A1W2PPZ6 126 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 CRYABP02511 175 aaKnown RBP15.66■□□□□ 0.1
SDC2-202ENST00000518385 NQO2P16083 231 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 TGFBR3Q03167 851 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 ACSF3Q4G176 576 aaPredicted RBP15.66■□□□□ 0.1
SDC2-202ENST00000518385 ZNF506Q5JVG8 444 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 ZCCHC14Q8WYQ9 949 aaKnown RBP15.66■□□□□ 0.1
SDC2-202ENST00000518385 MAFIPQ8WZ33 124 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 BORCS8Q96FH0 119 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 TMEM56Q96MV1 263 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 REPIN1Q9BWE0 567 aaKnown RBP15.66■□□□□ 0.1
SDC2-202ENST00000518385 RCL1Q9Y2P8 373 aaKnown RBP15.66■□□□□ 0.1
SDC2-202ENST00000518385 TMEM56-RWDD3S4R434 201 aa15.66■□□□□ 0.1
SDC2-202ENST00000518385 TRAV1-1A0A0B4J248 108 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 TRDCB7Z8K6 153 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 J3QW42 95 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 HLA-HP01893 362 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 EDN3P14138 238 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 TLE4Q04727 773 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 PNRC1Q12796 327 aaPredicted RBP15.65■□□□□ 0.1
SDC2-202ENST00000518385 KIAA0141Q14154 515 aaPredicted RBP15.65■□□□□ 0.1
SDC2-202ENST00000518385 FBXL14Q8N1E6 418 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 OR5D18Q8NGL1 313 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 FAM213BQ8TBF2 198 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 POM121L2Q96KW2 1035 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 PAPOLGQ9BWT3 736 aaKnown RBP15.65■□□□□ 0.1
SDC2-202ENST00000518385 TMEM242Q9NWH2 141 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 PRSS50Q9UI38 385 aa15.65■□□□□ 0.1
SDC2-202ENST00000518385 TRAV20A0A0B4J274 112 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms