RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ABHD3Q8WU67 409 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 WNT2BQ93097 391 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 CCL27Q9Y4X3 112 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 CXorf1O96002 111 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 ZNF137PP52743 207 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 DLX1P56177 255 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 RPL30P62888 115 aaKnown RBP11.68□□□□□ -0.54
TCOF1-214ENST00000515035 C1QL3Q5VWW1 255 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 SSX8Q7RTT4 187 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 FLYWCH2Q96CP2 140 aaKnown RBP11.68□□□□□ -0.54
TCOF1-214ENST00000515035 DDA1Q9BW61 102 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 A0A1B0GV90 55 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 M0R296 226 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 NMUP48645 174 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 MFAP2P55001 183 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 AESQ08117 197 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 COL19A1Q14993 1142 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 LRRC29Q8WV35 223 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 CDK5RAP2Q96SN8 1893 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 A0A1B0GU03 582 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 PITX3O75364 302 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 CCL2P13500 99 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 FZD5Q13467 585 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 ADTRPQ96IZ2 230 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 OR2V2Q96R30 315 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
TCOF1-214ENST00000515035 OR5AC2Q9NZP5 309 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 ZFP30Q9Y2G7 519 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 COL24A1Q17RW2 1714 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 C1QL1O75973 258 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-214ENST00000515035 ASB10Q8WXI3 467 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 MARVELD3Q96A59 401 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 ZNF764Q96H86 408 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-214ENST00000515035 UQCR10Q9UDW1 63 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 MT-CO3P00414 261 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 RNF224P0DH78 156 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 CD82P27701 267 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 UQCRFS1P47985 274 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 TMEM50BP56557 158 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 C12orf54Q6X4T0 127 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 DOLPP1Q86YN1 238 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 TGIF2LYQ8IUE0 185 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 OR6X1Q8NH79 312 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 GABRG3Q99928 467 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-214ENST00000515035 ST6GALNAC2Q9UJ37 374 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 KLK13Q9UKR3 277 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 MPC1Q9Y5U8 109 aa11.67□□□□□ -0.54
TCOF1-214ENST00000515035 HOXC4P09017 264 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-214ENST00000515035 MRGPRX3Q96LB0 322 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 SIRT4Q9Y6E7 314 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-214ENST00000515035 IGHV1OR15-9A0A0B4J2B8 117 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 LNP1A1A4G5 178 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 FABP2P12104 132 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 KLK2P20151 261 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 CDX1P47902 265 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-214ENST00000515035 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
TCOF1-214ENST00000515035 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 ATG4DQ86TL0 474 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-214ENST00000515035 GPA33Q99795 319 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 THYN1Q9P016 225 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 TCTAP57738 103 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 ISXQ2M1V0 245 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 HFEQ30201 348 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 HOGA1Q86XE5 327 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 PCGF1Q9BSM1 259 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 FAM186AA6NE01 2351 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 SH2D7A6NKC9 451 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-214ENST00000515035 MT-ND6P03923 174 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 SERF2P84101 59 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 TMEM211Q6ICI0 200 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 VSTM2AQ8TAG5 236 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 CBLN4Q9NTU7 201 aa11.66□□□□□ -0.54
TCOF1-214ENST00000515035 KLF7O75840 302 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 SRP14P37108 136 aaKnown RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 OR1L1Q8NH94 360 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 GAL3ST2Q9H3Q3 398 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 MYOZ1Q9NP98 299 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 R4GN57 208 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 CXorf65A6NEN9 183 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 ORM1P02763 201 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 FCARP24071 287 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 MMP16P51512 607 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 SLC35B1P78383 322 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 C16orf47Q6ZP98 133 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 ZNF519Q8TB69 540 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 SLC26A1Q9H2B4 701 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 PIPOXQ9P0Z9 390 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 FZR1Q9UM11 496 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 HSPB1P04792 205 aaKnown RBP11.65□□□□□ -0.54
TCOF1-214ENST00000515035 TFF2Q03403 129 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 IL11RAQ14626 422 aa11.65□□□□□ -0.54
TCOF1-214ENST00000515035 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms