RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ANKRD55Q3KP44 614 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 SLC16A9Q7RTY1 509 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 CPEB2Q7Z5Q1 589 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 CDC20BQ86Y33 519 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF441Q8N8Z8 693 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 SLC25A43Q8WUT9 341 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 DERL1Q9BUN8 251 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 PLEKHA1Q9HB21 404 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 HS3ST1O14792 307 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 ARL6IP5O75915 188 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 BGLAPP02818 100 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 OR5H8P0DN80 308 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 VSIG10L2P0DP72 767 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 MDKP21741 143 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 CTXN1P60606 82 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 VWA2Q5GFL6 755 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 MOGAT3Q86VF5 341 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 MUC20Q8N307 709 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 OR1B1Q8NGR6 318 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 SLC25A38Q96DW6 304 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 MS4A10Q96PG2 267 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 FOXQ1Q9C009 403 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 OR51B2Q9Y5P1 312 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 UNC13CQ8NB66 2214 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 A0A1B0GTH9 108 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 GPR6P46095 362 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 PIGPP57054 158 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 C1QL3Q5VWW1 255 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 FAM71F2Q6NXP2 309 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF788Q6ZQV5 615 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 CHST4Q8NCG5 386 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 OR2AE1Q8NHA4 323 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 HIST1H2AAQ96QV6 131 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 OR11A1Q9GZK7 315 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 UQCR10Q9UDW1 63 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF391Q9UJN7 358 aa6.49□□□□□ -1.37
PDLIM5-219ENST00000514743 TMEM272A0A1B0GTI8 110 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 A0A1W2PQD3 144 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 GSTZ1O43708 216 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SYNGR4O95473 234 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 GPANK1O95872 356 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 MYF5P13349 255 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 GFRA1P56159 465 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 GCSAMLQ5JQS6 135 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 WDR25Q64LD2 544 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 AMMECR1LQ6DCA0 310 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 MARCH3Q86UD3 253 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 CMTM4Q8IZR5 234 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 OR6N2Q8NGY6 317 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SEH1LQ96EE3 360 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 WDR76Q9H967 626 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 RAB18Q9NP72 206 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 KLK11Q9UBX7 282 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 IKZF2Q9UKS7 526 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 HSF4Q9ULV5 492 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 PHF3Q92576 2039 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 PYCARD-AS1I3L0S3 204 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 CTDSPLO15194 276 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SLC25A4P12235 298 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 ADRA2CP18825 462 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 CSRP1P21291 193 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 COL10A1Q03692 680 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 TMEM267Q0VDI3 215 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 P2RY6Q15077 328 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 HLA-BQ31612 363 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 EMC4Q5J8M3 183 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SOHLH1Q5JUK2 328 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 UBE2NLQ5JXB2 153 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 MUC15Q8N387 334 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SLC25A45Q8N413 288 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 OR4X1Q8NH49 305 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 MFSD8Q8NHS3 518 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 AMELYQ99218 206 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 STRADBQ9C0K7 418 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 COL6A3P12111 3177 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 TRBV5-5A0A0J9YX44 114 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 IFITM5A6NNB3 132 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 NPIPB7O75200 414 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 IL2RAP01589 272 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 DBHP09172 617 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 TNFRSF1AP19438 455 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SRPXP78539 464 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 BTNL8Q6UX41 500 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 TEX43Q6ZNM6 134 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 Q6ZRG5 221 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 BATF2Q8N1L9 274 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 OR52E5Q8NH55 327 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF563Q8TA94 476 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SMIM4Q8WVI0 70 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 IL22RA2Q969J5 263 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF501Q96CX3 271 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 QTRT1Q9BXR0 403 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 VN1R1Q9GZP7 353 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 SLC17A5Q9NRA2 495 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 NAT8Q9UHE5 227 aa6.48□□□□□ -1.37
PDLIM5-219ENST00000514743 RAD51DO75771 328 aa6.47□□□□□ -1.37
PDLIM5-219ENST00000514743 NDUFB6O95139 128 aa6.47□□□□□ -1.37
PDLIM5-219ENST00000514743 MAS1P04201 325 aa6.47□□□□□ -1.37
PDLIM5-219ENST00000514743 CSN2P05814 226 aa6.47□□□□□ -1.37
PDLIM5-219ENST00000514743 GATA4P43694 442 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms