RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 HOGA1Q86XE5 327 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 CALHM1Q8IU99 346 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 ARRDC1Q8N5I2 433 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 TEX29Q8N6K0 151 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 ZDHHC22Q8N966 263 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 POC1AQ8NBT0 407 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 OR5T2Q8NGG2 359 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 OR51S1Q8NGJ8 323 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 ASB13Q8WXK3 278 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 SNAPC3Q92966 411 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 ZNF486Q96H40 463 aaPredicted RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 ARHGAP5-AS1Q96IT6 56 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 FYTTD1Q96QD9 318 aaKnown RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 OR2A7Q96R45 310 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 CCL13Q99616 98 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 PRRT1Q99946 306 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 SSBP3Q9BWW4 388 aaPredicted RBP6.91□□□□□ -1.3
CCL28-204ENST00000514421 PECRQ9BY49 303 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 DNTTIP1Q9H147 329 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 WDR13Q9H1Z4 485 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 BANF2Q9H503 90 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 C7orf69Q9H7B7 122 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 RHOFQ9HBH0 211 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 MMP26Q9NRE1 261 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 SCP2D1Q9UJQ7 156 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 FLVCR2Q9UPI3 526 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 DOCK11Q5JSL3 2073 aa6.91□□□□□ -1.3
CCL28-204ENST00000514421 IGKV1-12A0A0C4DH73 117 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 OR2AT4A6NND4 320 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 KIAA1324LA8MWY0 1029 aaPredicted RBP6.9□□□□□ -1.3
CCL28-204ENST00000514421 DISC1C4P0D8 188 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 RGS13O14921 159 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 GPR37O15354 613 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 TMPRSS2O15393 492 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 SYNGR1O43759 233 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 IFNA2P01563 188 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 IGKV1D-12P01611 117 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 LIPFP07098 398 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 PGA5P0DJD9 388 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 TMEM225BP0DP42 221 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 VSIG10L2P0DP72 767 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 PSG2P11465 335 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 ANXA3P12429 323 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 AMY2BP19961 511 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 DTYMKP23919 212 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 SRP14P37108 136 aaKnown RBP6.9□□□□□ -1.3
CCL28-204ENST00000514421 CD83Q01151 205 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 PAX2Q02962 417 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 PAX8Q06710 450 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 RNASE10Q5GAN6 216 aaKnown RBP6.9□□□□□ -1.3
CCL28-204ENST00000514421 SIGIRRQ6IA17 410 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 BTNL3Q6UXE8 466 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 ACP7Q6ZNF0 438 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 ZNF788Q6ZQV5 615 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 MKXQ8IYA7 352 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 CHST4Q8NCG5 386 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 OR51T1Q8NGJ9 327 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 OR13C8Q8NGS7 320 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 ANGPTL6Q8NI99 470 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 NPRL2Q8WTW4 380 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 NUDCD2Q8WVJ2 157 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 MRGPRFQ96AM1 343 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 S100A13Q99584 98 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 SLC6A7Q99884 636 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 NRIP2Q9BQI9 281 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 GINS4Q9BRT9 223 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 TMPRSS13Q9BYE2 586 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 TINAGL1Q9GZM7 467 aaPredicted RBP6.9□□□□□ -1.3
CCL28-204ENST00000514421 CHST6Q9GZX3 395 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 ZMAT3Q9HA38 289 aaKnown RBP6.9□□□□□ -1.3
CCL28-204ENST00000514421 GPN1Q9HCN4 374 aaPredicted RBP6.9□□□□□ -1.3
CCL28-204ENST00000514421 ING4Q9UNL4 249 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 INSIG2Q9Y5U4 225 aa6.9□□□□□ -1.3
CCL28-204ENST00000514421 MEIS3P1A6NDR6 274 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 RFPL4AA6NLU0 287 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 RFPL4AL1F8VTS6 287 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 H3BUI4 141 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 DVL1O14640 695 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 NDUFB3O43676 98 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 CREBL2O60519 120 aaPredicted RBP6.89□□□□□ -1.31
CCL28-204ENST00000514421 NXPH2O95156 264 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 AVPP01185 164 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 FAM157CP0CG43 387 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 HLA-GP17693 338 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 SRD5A1P18405 259 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 CXCL3P19876 107 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 SERPINA2P20848 420 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 CHATP28329 748 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 BLVRBP30043 206 aaPredicted RBP6.89□□□□□ -1.31
CCL28-204ENST00000514421 PRDX2P32119 198 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 GABRA2P47869 451 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 RBM11P57052 281 aaKnown RBP6.89□□□□□ -1.31
CCL28-204ENST00000514421 GNG2P59768 71 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 UBE2MP61081 183 aaKnown RBP6.89□□□□□ -1.31
CCL28-204ENST00000514421 ERVK11-1P61568 191 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 SRSF4Q08170 494 aaKnown RBP6.89□□□□□ -1.31
CCL28-204ENST00000514421 CBX3Q13185 183 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 RSU1Q15404 277 aa6.89□□□□□ -1.31
CCL28-204ENST00000514421 SRSF7Q16629 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCL28-204ENST00000514421 SMIM21Q3B7S5 101 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms