RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PITPNAQ00169 270 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 PAX2Q02962 417 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 C6orf183Q5T699 404 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 TMEM200BQ69YZ2 307 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 C15orf40Q8WUR7 153 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 ARHGAP5-AS1Q96IT6 56 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 ZNF714Q96N38 554 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 FAAP24Q9BTP7 215 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 MMP26Q9NRE1 261 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 ING3Q9NXR8 418 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 KCNIP1Q9NZI2 227 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 NBEAL1Q6ZS30 2694 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 A0A0A6YYD4 124 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 FAM25AB3EWG3 89 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 FAM25CB3EWG5 89 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 FAM25GB3EWG6 89 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 RBP4P02753 201 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 GSTP1P09211 210 aaKnown RBP16.57■□□□□ 0.24
USP53-208ENST00000514305 ZNF728P0DKX0 622 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 HIST1H1DP16402 221 aaKnown RBP16.57■□□□□ 0.24
USP53-208ENST00000514305 GLIPR1P48060 266 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 TMEM50BP56557 158 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 PAX8Q06710 450 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 RSBN1Q5VWQ0 802 aaPredicted RBP16.57■□□□□ 0.24
USP53-208ENST00000514305 ZNF497Q6ZNH5 498 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 FAM216AQ8WUB2 273 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 CMSS1Q9BQ75 279 aaKnown RBP16.57■□□□□ 0.24
USP53-208ENST00000514305 C19orf12Q9NSK7 152 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 RABL2AQ9UBK7 228 aaPredicted RBP16.57■□□□□ 0.24
USP53-208ENST00000514305 OPN4Q9UHM6 478 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 KIF25Q9UIL4 384 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 RABL2BQ9UNT1 228 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 A3GALT2U3KPV4 340 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 ARHGAP32A7KAX9 2087 aa16.57■□□□□ 0.24
USP53-208ENST00000514305 ZNF729A6NN14 1252 aaPredicted RBP16.56■□□□□ 0.24
USP53-208ENST00000514305 XRCC3O43542 346 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 FCN3O75636 299 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 TOX4O94842 621 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 MT-ND4P03905 459 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 ARF6P62330 175 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 ARFRP1Q13795 201 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 PNLIPRP3Q17RR3 467 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 CDNFQ49AH0 187 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 MOB1BQ7L9L4 216 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 ZNF554Q86TJ5 538 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 FGFRL1Q8N441 504 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 MCFD2Q8NI22 146 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 GCDHQ92947 438 aaPredicted RBP16.56■□□□□ 0.24
USP53-208ENST00000514305 COQ2Q96H96 371 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 SULT4A1Q9BR01 284 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 DCUN1D5Q9BTE7 237 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 MMP27Q9H306 513 aa16.56■□□□□ 0.24
USP53-208ENST00000514305 METTL8Q9H825 291 aaKnown RBP16.56■□□□□ 0.24
USP53-208ENST00000514305 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP53-208ENST00000514305 FOXI3A8MTJ6 420 aaPredicted RBP16.55■□□□□ 0.24
USP53-208ENST00000514305 FPR2P25090 351 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 S100A5P33763 92 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 GLP1RP43220 463 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 ERVFRD-1P60508 538 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 PLA2G7Q13093 441 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 TMEM69Q5SWH9 247 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 OR52W1Q6IF63 320 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 TPRX1Q8N7U7 411 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 PLPPR1Q8TBJ4 325 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 DACT3Q96B18 629 aaPredicted RBP16.55■□□□□ 0.24
USP53-208ENST00000514305 SLC25A38Q96DW6 304 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 WDFY2Q96P53 400 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 SLC6A7Q99884 636 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 C6orf62Q9GZU0 229 aaPredicted RBP16.55■□□□□ 0.24
USP53-208ENST00000514305 C12orf4Q9NQ89 552 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 DOCK11Q5JSL3 2073 aa16.55■□□□□ 0.24
USP53-208ENST00000514305 TRAV18A0A075B6X5 111 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 A6NHS1 94 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 SPINT2O43291 252 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 ORC5O43913 435 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 HPGDSO60760 199 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 CLPXO76031 633 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 TPPPO94811 219 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 GNB3P16520 340 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 GNG2P59768 71 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 TMEM30BQ3MIR4 351 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 PLAC9Q5JTB6 97 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 NCR3LG1Q68D85 454 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 METAP1DQ6UB28 335 aaPredicted RBP16.54■□□□□ 0.24
USP53-208ENST00000514305 GAPTQ8N292 157 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 OR10A7Q8NGE5 316 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 SLIRPQ9GZT3 109 aaKnown RBP16.54■□□□□ 0.24
USP53-208ENST00000514305 HEXA-AS1Q9H8Q6 139 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 ZNF581Q9P0T4 197 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 AK3Q9UIJ7 227 aa16.54■□□□□ 0.24
USP53-208ENST00000514305 MFNGO00587 321 aa16.53■□□□□ 0.24
USP53-208ENST00000514305 CDK2P24941 298 aa16.53■□□□□ 0.24
USP53-208ENST00000514305 COMPP49747 757 aaPredicted RBP16.53■□□□□ 0.24
USP53-208ENST00000514305 MOGAT2Q3SYC2 334 aa16.53■□□□□ 0.24
USP53-208ENST00000514305 HACD4Q5VWC8 232 aa16.53■□□□□ 0.24
USP53-208ENST00000514305 BAIAP2L2Q6UXY1 529 aa16.53■□□□□ 0.24
USP53-208ENST00000514305 C3orf56Q8N813 242 aa16.53■□□□□ 0.24
USP53-208ENST00000514305 PCGF1Q9BSM1 259 aa16.53■□□□□ 0.24
USP53-208ENST00000514305 TRBV6-6A0A0A6YYG2 114 aa16.52■□□□□ 0.24
USP53-208ENST00000514305 KBTBD11-OT1A0A1B0GTJ5 212 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms