RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 TOMM40LQ969M1 308 aa5.83□□□□□ -1.48
HTT-212ENST00000513639 ARL11Q969Q4 196 aa5.83□□□□□ -1.48
HTT-212ENST00000513639 PPIL3Q9H2H8 161 aaKnown RBP5.83□□□□□ -1.48
HTT-212ENST00000513639 VCXQ9H320 206 aa5.83□□□□□ -1.48
HTT-212ENST00000513639 PLCXD1Q9NUJ7 323 aa5.83□□□□□ -1.48
HTT-212ENST00000513639 CNOT2Q9NZN8 540 aaKnown RBP5.83□□□□□ -1.48
HTT-212ENST00000513639 CLEC2DQ9UHP7 191 aa5.83□□□□□ -1.48
HTT-212ENST00000513639 ERGIC3Q9Y282 383 aa5.83□□□□□ -1.48
HTT-212ENST00000513639 LRRC42Q9Y546 428 aa5.83□□□□□ -1.48
HTT-212ENST00000513639 TRBV5-5A0A0J9YX44 114 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 FAM172BPA6NC97 362 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 FAM90A10PA6NDY2 464 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 FAM90A7PA6NKC0 464 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 FAM90A23PA8MXZ1 464 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 G3V4G9 280 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 SPINT2O43291 252 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 FGF16O43320 207 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 DUS4LO95620 317 aaKnown RBP5.82□□□□□ -1.48
HTT-212ENST00000513639 MT-ND4P03905 459 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 PF4V1P10720 104 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 IGFBP3P17936 291 aaPredicted RBP5.82□□□□□ -1.48
HTT-212ENST00000513639 CD33P20138 364 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 IL3RAP26951 378 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 MAPK3P27361 379 aaPredicted RBP5.82□□□□□ -1.48
HTT-212ENST00000513639 SLC6A1P30531 599 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 GDNFP39905 211 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 CAPGP40121 348 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 DOC2BQ14184 412 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 BEAN1Q3B7T3 259 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 TMEM30BQ3MIR4 351 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 Q3ZCU0 254 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 SLC22A6Q4U2R8 563 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 C9orf152Q5JTZ5 239 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 XAF1Q6GPH4 301 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 TRAT1Q6PIZ9 186 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 C8orf59Q8N0T1 100 aaPredicted RBP5.82□□□□□ -1.48
HTT-212ENST00000513639 LYG1Q8N1E2 194 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 JAGN1Q8N5M9 183 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 MS4A15Q8N5U1 240 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 LINC00311Q8N616 119 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 DRAM1Q8N682 238 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 NEK7Q8TDX7 302 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 CHPT1Q8WUD6 406 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 RGP1Q92546 391 aaPredicted RBP5.82□□□□□ -1.48
HTT-212ENST00000513639 ZNF184Q99676 751 aaPredicted RBP5.82□□□□□ -1.48
HTT-212ENST00000513639 UQCC2Q9BRT2 126 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 GON7Q9BXV9 100 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 NECAP2Q9NVZ3 263 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 GHRLQ9UBU3 117 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 MOB4Q9Y3A3 225 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 SIRT4Q9Y6E7 314 aaPredicted RBP5.82□□□□□ -1.48
HTT-212ENST00000513639 DSCAML1Q8TD84 2053 aa5.82□□□□□ -1.48
HTT-212ENST00000513639 TRBV5-7A0A0A0MS05 114 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 ADARB2-AS1A8MUL3 147 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 SDCBPO00560 298 aaPredicted RBP5.81□□□□□ -1.48
HTT-212ENST00000513639 MYL12BO14950 172 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 AMY1AP04745 511 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 AMY2AP04746 511 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 SNRNP70P08621 437 aaKnown RBP5.81□□□□□ -1.48
HTT-212ENST00000513639 TMEM11P17152 192 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 CELP19835 753 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 SERPINA2P20848 420 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 FUT3P21217 361 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 RANBP1P43487 201 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 RPS11P62280 158 aaKnown RBP eCLIP5.81□□□□□ -1.48
HTT-212ENST00000513639 SLC35B1P78383 322 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 EBI3Q14213 229 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 HNF4GQ14541 408 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 LTC4SQ16873 150 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 C6orf183Q5T699 404 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 RNLSQ5VYX0 342 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 GLIPR1L1Q6UWM5 242 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 ZNF497Q6ZNH5 498 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 MOB3BQ86TA1 216 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 ZNF554Q86TJ5 538 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 COMMD1Q8N668 190 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 ZNF485Q8NCK3 441 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 OR8H1Q8NGG4 311 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 OR2T10Q8NGZ9 312 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 OR56B4Q8NH76 319 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 PLPPR1Q8TBJ4 325 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 CCDC107Q8WV48 283 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 LEAP2Q969E1 77 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 MYDGFQ969H8 173 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 GPR61Q9BZJ8 451 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 ZFP57Q9NU63 452 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 KCNIP1Q9NZI2 227 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 ZMAT5Q9UDW3 170 aaKnown RBP5.81□□□□□ -1.48
HTT-212ENST00000513639 PSORS1C1Q9UIG5 152 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 TRAPPC2LQ9UL33 140 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 MRPS28Q9Y2Q9 187 aaKnown RBP5.81□□□□□ -1.48
HTT-212ENST00000513639 PEX16Q9Y5Y5 336 aa5.81□□□□□ -1.48
HTT-212ENST00000513639 IGHV1-3A0A0C4DH29 117 aa5.8□□□□□ -1.48
HTT-212ENST00000513639 A0A1W2PPK0 400 aa5.8□□□□□ -1.48
HTT-212ENST00000513639 A0A1W2PRX2 142 aa5.8□□□□□ -1.48
HTT-212ENST00000513639 PSMB11A5LHX3 300 aa5.8□□□□□ -1.48
HTT-212ENST00000513639 NCBP2LA6PVI3 153 aaKnown RBP5.8□□□□□ -1.48
HTT-212ENST00000513639 SERPINE3A8MV23 424 aa5.8□□□□□ -1.48
HTT-212ENST00000513639 H0YHG0 523 aa5.8□□□□□ -1.48
HTT-212ENST00000513639 AIPO00170 330 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms