RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 LAMA2P24043 3122 aaKnown RBP11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 A0A087WV48 116 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 LRRC3CA6NJW4 275 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 METTL15P1P0C7V9 234 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 S100A7P31151 101 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 TAGLN2P37802 199 aaKnown RBP11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 IGSF11Q5DX21 431 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 STUMQ69YW2 141 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 RPL7L1Q6DKI1 246 aaKnown RBP11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 ZNF826PQ6ZT77 177 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 RSPO3Q9BXY4 272 aaPredicted RBP11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 NARFLQ9H6Q4 476 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 PLXNA2O75051 1894 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 OR5H1A6NKK0 313 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 F6UZH7 168 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 NPBWR2P48146 333 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 CLDN18P56856 261 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 UNC119Q13432 240 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 C1QL2Q7Z5L3 287 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 ADAMTS17Q8TE56 1095 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
PCDHA4-202ENST00000512229 J3QW42 95 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 RGS13O14921 159 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 LY86O95711 162 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 ADH4P08319 380 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 SFTPCP11686 197 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 RHOFQ9HBH0 211 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 OSGIN2Q9Y236 505 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 WIPI2Q9Y4P8 454 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 HELZP42694 1942 aaKnown RBP11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 ZNF716A6NP11 495 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 SYNGR2O43760 224 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 DCAF12L2Q5VW00 463 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 ABLIM2Q6H8Q1 611 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 TPRX1Q8N7U7 411 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 C20orf24Q9BUV8 137 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 hCG_38984A0A1B0GV85 526 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 MFNGO00587 321 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 AQP7O14520 342 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 B3GALNT1O75752 331 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 SCTP09683 121 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 HTD2P86397 168 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 ADIRFQ15847 76 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 SAXO1Q8IYX7 474 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 OR2V2Q96R30 315 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 ZNF251Q9BRH9 671 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 MED9Q9NWA0 146 aa11.29□□□□□ -0.6
PCDHA4-202ENST00000512229 UBE2L5PA0A1B0GUS4 154 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 CHST1O43916 411 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 MT-ND4LP03901 98 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 FAM122CQ6P4D5 195 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 BTNL3Q6UXE8 466 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 NPTNQ9Y639 398 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 PINLYPA6NC86 204 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 OR2H2O95918 312 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 FGF7P21781 194 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 F2RP25116 425 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 PTGDSP41222 190 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 THBS3P49746 956 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 RAB13P51153 203 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 P2RX3P56373 397 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 OR2B8PP59922 312 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 HIST2H3PS2Q5TEC6 136 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 PXDC1Q5TGL8 231 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 OR4S2Q8NH73 311 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 DAZAP1Q96EP5 407 aaKnown RBP11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 WDYHV1Q96HA8 205 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 DLL3Q9NYJ7 618 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 V9GYS6 101 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 CUL9Q8IWT3 2517 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 NKX2-6A6NCS4 301 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 MGST3O14880 152 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 FABP1P07148 127 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 RRASP10301 218 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 TMEM267Q0VDI3 215 aaPredicted RBP11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 KCNIP4Q6PIL6 250 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 MRGPRFQ96AM1 343 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 RPEQ96AT9 228 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 SSX3Q99909 188 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 IGHV3OR15-7A0A075B7D8 119 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 ATP6V1G2-DDX39BF2Z307 99 aa11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 RPS2P15880 293 aaKnown RBP11.28□□□□□ -0.6
PCDHA4-202ENST00000512229 IGFBP3P17936 291 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms