RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 TMEM14AQ9Y6G1 99 aa8.97□□□□□ -0.97
RNF4-216ENST00000511859 TRBV2A0A0J9YWF9 115 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 EFCAB10A6NFE3 127 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 A6NIN4 97 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 J3QLW9 94 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 IGF1P05019 195 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 ZNF19P17023 458 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 NFYBP25208 207 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 DUSP1P28562 367 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 C21orf33P30042 268 aaPredicted RBP8.96□□□□□ -0.98
RNF4-216ENST00000511859 GLIPR1P48060 266 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 RIDAP52758 137 aaKnown RBP8.96□□□□□ -0.98
RNF4-216ENST00000511859 ROM1Q03395 351 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 AESQ08117 197 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 KIAA0141Q14154 515 aaPredicted RBP8.96□□□□□ -0.98
RNF4-216ENST00000511859 C17orf58Q2M2W7 97 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 ACSM6Q6P461 480 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 Q6ZSR3 168 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 Q8N9W7 124 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 ASB17Q8WXJ9 295 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 TMEM80Q96HE8 168 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 EAF1Q96JC9 268 aaPredicted RBP8.96□□□□□ -0.98
RNF4-216ENST00000511859 RASL11BQ9BPW5 248 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 ALG8Q9BVK2 526 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 OR51J1Q9H342 316 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 MOB1AQ9H8S9 216 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 FGF20Q9NP95 211 aaPredicted RBP8.96□□□□□ -0.98
RNF4-216ENST00000511859 MRPS18AQ9NVS2 196 aaKnown RBP8.96□□□□□ -0.98
RNF4-216ENST00000511859 ERVK13-1Q9NX77 482 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 CLEC2DQ9UHP7 191 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 MRM2Q9UI43 246 aaKnown RBP8.96□□□□□ -0.98
RNF4-216ENST00000511859 LRRC42Q9Y546 428 aa8.96□□□□□ -0.98
RNF4-216ENST00000511859 KBTBD11-OT1A0A1B0GTJ5 212 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 ODAMA1E959 279 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 MAGEA13PA6NCF6 341 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 METTL15A6NJ78 407 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 H3BSH0 61 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 CYB5AP00167 134 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 KRT8P05787 483 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 CSN2P05814 226 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 OR8U9P0C7N5 309 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 LIMS3P0CW19 117 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 LIMS4P0CW20 117 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 CRHBPP24387 322 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 MFGE8Q08431 387 aaPredicted RBP8.95□□□□□ -0.98
RNF4-216ENST00000511859 DIAPH2-AS1Q14236 149 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 GALEQ14376 348 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 HAGHQ16775 308 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 RBM48Q5RL73 367 aaKnown RBP8.95□□□□□ -0.98
RNF4-216ENST00000511859 UTF1Q5T230 341 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 OR2G6Q5TZ20 316 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 ELMOD2Q8IZ81 293 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 ZNF565Q8N9K5 539 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 OR2T10Q8NGZ9 312 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 DLX4Q92988 240 aaPredicted RBP8.95□□□□□ -0.98
RNF4-216ENST00000511859 KIRREL1Q96J84 757 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 C4orf36Q96KX1 117 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 KCTD7Q96MP8 289 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 MNTQ99583 582 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 CCDC90BQ9GZT6 254 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 ISG20L2Q9H9L3 353 aaKnown RBP8.95□□□□□ -0.98
RNF4-216ENST00000511859 GNB4Q9HAV0 340 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 RBFOX1Q9NWB1 397 aaKnown RBP8.95□□□□□ -0.98
RNF4-216ENST00000511859 FKBP14Q9NWM8 211 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 CNOT2Q9NZN8 540 aaKnown RBP8.95□□□□□ -0.98
RNF4-216ENST00000511859 OR6C3Q9NZP0 311 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 IL36RNQ9UBH0 155 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 DIMT1Q9UNQ2 313 aaKnown RBP8.95□□□□□ -0.98
RNF4-216ENST00000511859 TPRKBQ9Y3C4 175 aa8.95□□□□□ -0.98
RNF4-216ENST00000511859 IGKV1-27A0A075B6S5 117 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 A0A1B0GTI1 187 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 IRGMA1A4Y4 181 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 SIRPB1O00241 398 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 GATBO75879 557 aaKnown RBP8.94□□□□□ -0.98
RNF4-216ENST00000511859 OR2H2O95918 312 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 SERPINA3P01011 423 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 MT-ND2P03891 347 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 GAPDHP04406 335 aaKnown RBP8.94□□□□□ -0.98
RNF4-216ENST00000511859 CDK1P06493 297 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 MYL12AP19105 171 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 DCKP27707 260 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 NPBWR2P48146 333 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 ZP1P60852 638 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 GNB1P62873 340 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 UBE2V2Q15819 145 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 ODF4Q2M2E3 257 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 KRBOX4Q5JUW0 171 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 SLC16A12Q6ZSM3 486 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 FAM220AQ7Z4H9 259 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 MOB3BQ86TA1 216 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 Q8N6K4 173 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 BORCS8Q96FH0 119 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 OR4C12Q96R67 309 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 EXOSC4Q9NPD3 245 aaKnown RBP8.94□□□□□ -0.98
RNF4-216ENST00000511859 PLSCR3Q9NRY6 295 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 PSG11Q9UQ72 335 aa8.94□□□□□ -0.98
RNF4-216ENST00000511859 LOC110117498-PIK3R3F6TDL0 507 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 HSPA12AO43301 675 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 RGS10O43665 173 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms