RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 PPIAL4AQ9Y536 164 aa12.72□□□□□ -0.37
SCLT1-209ENST00000511426 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
SCLT1-209ENST00000511426 IGHV1-69-2A0A0G2JMI3 117 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 BOLA2-SMG1P6H3BVE0 249 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 SNAPC5O75971 98 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 SFT2D2O95562 160 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-209ENST00000511426 S100GP29377 79 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 CD80P33681 288 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 P2RX3P56373 397 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 HFEQ30201 348 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 TMEM30BQ3MIR4 351 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 SGPP2Q8IWX5 399 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 H1FOOQ8IZA3 346 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF565Q8N9K5 539 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 BOLLQ8N9W6 283 aaKnown RBP12.71□□□□□ -0.37
SCLT1-209ENST00000511426 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 NEU4Q8WWR8 484 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-209ENST00000511426 GALMQ96C23 342 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
SCLT1-209ENST00000511426 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 TAF9BQ9HBM6 251 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 MGAT4CQ9UBM8 478 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 KIF25Q9UIL4 384 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 OR2W1Q9Y3N9 320 aa12.71□□□□□ -0.37
SCLT1-209ENST00000511426 BET1O15155 118 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 B3GALNT1O75752 331 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 OR2A4O95047 310 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 C1QBP02746 253 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 AKR1C4P17516 323 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 AADACP22760 399 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 VAMP1P23763 118 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 CD34P28906 385 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
SCLT1-209ENST00000511426 RND3P61587 244 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 AESQ08117 197 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 C11orf71Q6IPW1 123 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 OR52B4Q8NGK2 314 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 COQ8AQ8NI60 647 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 TMEM230Q96A57 120 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 GALNT14Q96FL9 552 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 OR2A7Q96R45 310 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 ZNF436Q9C0F3 470 aaPredicted RBP12.7□□□□□ -0.38
SCLT1-209ENST00000511426 LIME1Q9H400 295 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 KAAG1Q9UBP8 84 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 KCNIP3Q9Y2W7 256 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 MAB21L2Q9Y586 359 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 CHD3Q12873 2000 aaKnown RBP12.7□□□□□ -0.38
SCLT1-209ENST00000511426 IGKV1-6A0A0C4DH72 117 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 ODAMA1E959 279 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 CRYM-AS1A6NIL9 109 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 RGS11O94810 467 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 HEXAP06865 529 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 RAP2BP61225 183 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 HTD2P86397 168 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 CD300CQ08708 224 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 MSMO1Q15800 293 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 ADAD2Q8NCV1 583 aaKnown RBP12.7□□□□□ -0.38
SCLT1-209ENST00000511426 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
SCLT1-209ENST00000511426 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
SCLT1-209ENST00000511426 IGHV3OR15-7A0A075B7D8 119 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 SPINT2O43291 252 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 RPS2P15880 293 aaKnown RBP12.69□□□□□ -0.38
SCLT1-209ENST00000511426 CXCL3P19876 107 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 NFYAP23511 347 aaPredicted RBP12.69□□□□□ -0.38
SCLT1-209ENST00000511426 KCTD9Q7L273 389 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 CMTM1Q8IZ96 169 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 CCL17Q92583 94 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 TOMM40LQ969M1 308 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 C14orf79Q96F83 325 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 AKR1E2Q96JD6 320 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 FYTTD1Q96QD9 318 aaKnown RBP12.69□□□□□ -0.38
SCLT1-209ENST00000511426 SLC2A9Q9NRM0 540 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 LPAR3Q9UBY5 353 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 PLCE1Q9P212 2302 aa12.69□□□□□ -0.38
SCLT1-209ENST00000511426 A6NNC1 897 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 C12orf77C9JDV5 145 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 GPR31O00270 319 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 HSPA12AO43301 675 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 SLC22A5O76082 557 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 WNT2P09544 360 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 DANCRP0C864 163 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 IL2RGP31785 369 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 PIGPP57054 158 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 FXYD4P59646 89 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 SRPXP78539 464 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 BAMBIQ13145 260 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 NOXA1Q86UR1 476 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 ZCCHC24Q8N2G6 241 aaKnown RBP12.68□□□□□ -0.38
SCLT1-209ENST00000511426 HYLS1Q96M11 299 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 SPOCK3Q9BQ16 436 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 SUCNR1Q9BXA5 334 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 ANKHD1Q8IWZ3 2542 aaKnown RBP12.68□□□□□ -0.38
SCLT1-209ENST00000511426 USP24Q9UPU5 2620 aa12.68□□□□□ -0.38
SCLT1-209ENST00000511426 DBX1A6NMT0 343 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms