RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 RFPL4AL1F8VTS6 287 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 H7C2Y5 167 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 ARPC5O15511 151 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR1F1O43749 312 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 CXCL13O43927 109 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR2F2O95006 317 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 APOC1P02654 83 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 ERCC1P07992 297 aaPredicted RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR2T7P0C7T2 308 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 PPIAL4FP0DN26 164 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 COX5AP20674 150 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 DRD5P21918 477 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 SLC2A5P22732 501 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 ATP5A1P25705 553 aaKnown RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 RAD52P43351 418 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 GPR4P46093 362 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 NCBP2P52298 156 aaKnown RBP eCLIP4.28□□□□□ -1.72
GYPB-212ENST00000511198 RAB38P57729 211 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 BTN3A2P78410 334 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 ZNF85Q03923 595 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 TGM3Q08188 693 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR2F1Q13607 317 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 NDUFAF6Q330K2 333 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 ZNF660Q6AZW8 331 aaPredicted RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 ALKAL2Q6UX46 152 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 UNQ9370/PRO34162Q6UXP9 181 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 APOOLQ6UXV4 268 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 BRD3OSQ6XYD6 125 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 TMPRSS11FQ6ZWK6 438 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 SZRD1Q7Z422 152 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 NRMQ8IXM6 262 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 CDK20Q8IZL9 346 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR52E2Q8NGJ4 325 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR5D16Q8NGK9 328 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR2T27Q8NH04 317 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR10D3Q8NH80 312 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 CCDC107Q8WV48 283 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 PCNPQ8WW12 178 aaKnown RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 THRSPQ92748 146 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 GHSRQ92847 366 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 HAVCR1Q96D42 359 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 RAB39BQ96DA2 213 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 GIMAP5Q96F15 307 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 S100A16Q96FQ6 103 aaKnown RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 RBM18Q96H35 190 aaKnown RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 SAMD8Q96LT4 415 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 OR7D2Q96RA2 312 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 MCHR1Q99705 422 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 SEC22CQ9BRL7 303 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 ARL6Q9H0F7 186 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 ALX4Q9H161 411 aaPredicted RBP4.28□□□□□ -1.72
GYPB-212ENST00000511198 ADGRL4Q9HBW9 690 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 EQTNQ9NQ60 294 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 BIN3Q9NQY0 253 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 RASL12Q9NYN1 266 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 MBD2Q9UBB5 411 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 DKKL1Q9UK85 242 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 POMT1Q9Y6A1 747 aa4.28□□□□□ -1.72
GYPB-212ENST00000511198 FXYD6-FXYD2A0A087WZ82 144 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 A0A1W2PP11 408 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 ACOD1A6NK06 481 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 IFITM5A6NNB3 132 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 E9PI62 339 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 F8W036 122 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 J3QLW9 94 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 BCL2L11O43521 198 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 RAD51DO75771 328 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 ATG12O94817 140 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 SLC2A10O95528 541 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 TBX6O95947 436 aaPredicted RBP4.27□□□□□ -1.73
GYPB-212ENST00000511198 AK1P00568 194 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 IGHV4-59P01825 116 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 APOC3P02656 99 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 OPN1LWP04000 364 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 HMGN2P05204 90 aaKnown RBP4.27□□□□□ -1.73
GYPB-212ENST00000511198 IFI6P09912 130 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 SLC25A4P12235 298 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 ZNF19P17023 458 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 CSNK2A2P19784 350 aaPredicted RBP4.27□□□□□ -1.73
GYPB-212ENST00000511198 RPS4Y1P22090 263 aaKnown RBP4.27□□□□□ -1.73
GYPB-212ENST00000511198 SLC6A6P31641 620 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 AHRP35869 848 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 RBM34P42696 430 aaKnown RBP4.27□□□□□ -1.73
GYPB-212ENST00000511198 SSR2P43308 183 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 OR3A2P47893 321 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 RAB13P51153 203 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 TAS2R20P59543 309 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 LASP1Q14847 261 aaKnown RBP4.27□□□□□ -1.73
GYPB-212ENST00000511198 ZMYND11Q15326 602 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 MICBQ29980 383 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 HFEQ30201 348 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 ZNF876PQ49A33 203 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 WDR38Q5JTN6 314 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 SLC35D3Q5M8T2 416 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 TMEM69Q5SWH9 247 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 FAM27D1Q5T7N8 215 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 OR4C11Q6IEV9 310 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 SLC36A1Q7Z2H8 476 aa4.27□□□□□ -1.73
GYPB-212ENST00000511198 NUP54Q7Z3B4 507 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms