RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MOSP00540 346 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 HTR1AP08908 422 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF616Q08AN1 781 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 KISS1Q15726 138 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
CXCL1-202ENST00000509101 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 OR1N2Q8NGR9 330 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 MYOZ3Q8TDC0 251 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 RTN4IP1Q8WWV3 396 aaPredicted RBP12.44□□□□□ -0.42
CXCL1-202ENST00000509101 CITED4Q96RK1 184 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 GABARAPL1Q9H0R8 117 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 ZCCHC4Q9H5U6 513 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 FAM118AQ9NWS6 357 aa12.44□□□□□ -0.42
CXCL1-202ENST00000509101 I3L521 148 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 SAP30O75446 220 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 SPNP16150 400 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 CD1BP29016 333 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 SOX6P35712 828 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 GNB1P62873 340 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 IL13RA2Q14627 380 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 PIGYQ3MUY2 71 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF691Q5VV52 312 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 KDM4DQ6B0I6 523 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 ADAMTSL5Q6ZMM2 481 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF429Q86V71 674 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 FAM71E2Q8N5Q1 922 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 OR10K1Q8NGX5 313 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 EME1Q96AY2 570 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF581Q9P0T4 197 aa12.43□□□□□ -0.42
CXCL1-202ENST00000509101 IGHV3-43A0A0B4J1X8 118 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 SAC3D1A6NKF1 404 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 OVOL1O14753 267 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 SULT1B1O43704 296 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 IGF1P05019 195 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 OR5H8P0DN80 308 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 IGHV3-43DP0DP04 118 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 SLC2A2P11168 524 aaPredicted RBP12.42□□□□□ -0.42
CXCL1-202ENST00000509101 FCGR1AP12314 374 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 MYF6P23409 242 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 IL3RAP26951 378 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 KCNJ3P48549 501 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 F2RL1P55085 397 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 PAX5Q02548 391 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 ELP2Q6IA86 826 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 FDX2Q6P4F2 183 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 ZDHHC13Q8IUH4 622 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 LINC00311Q8N616 119 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 DCUN1D4Q92564 292 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 CENPNQ96H22 339 aaPredicted RBP12.42□□□□□ -0.42
CXCL1-202ENST00000509101 UBE2E2Q96LR5 201 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF107Q9UII5 783 aaPredicted RBP12.42□□□□□ -0.42
CXCL1-202ENST00000509101 OAZ3Q9UMX2 235 aa12.42□□□□□ -0.42
CXCL1-202ENST00000509101 TRIM64CA6NLI5 447 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 OR4C45A6NMZ5 311 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 SDCBPO00560 298 aaPredicted RBP12.41□□□□□ -0.42
CXCL1-202ENST00000509101 SLC16A6O15403 523 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 GP9P14770 177 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 POLR2IP36954 125 aaKnown RBP12.41□□□□□ -0.42
CXCL1-202ENST00000509101 CCR9P51686 369 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 GABPB1Q06547 395 aaPredicted RBP12.41□□□□□ -0.42
CXCL1-202ENST00000509101 TMED1Q13445 227 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 TMEM65Q6PI78 240 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF491Q8N8L2 437 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 SUMF2Q8NBJ7 301 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 OR8H1Q8NGG4 311 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 RFKQ969G6 155 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 CIB1Q99828 191 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 DPCDQ9BVM2 203 aaPredicted RBP12.41□□□□□ -0.42
CXCL1-202ENST00000509101 FAM192AQ9GZU8 254 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 GFOD1Q9NXC2 390 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 ENOPH1Q9UHY7 261 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 ZNF580Q9UK33 172 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 VSIG4Q9Y279 399 aa12.41□□□□□ -0.42
CXCL1-202ENST00000509101 DAPL1A0PJW8 107 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 GABRPO00591 440 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 SLC31A2O15432 143 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 RUNX1Q01196 453 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.42
CXCL1-202ENST00000509101 RSU1Q15404 277 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 SRSF7Q16629 238 aaKnown RBP eCLIP12.4□□□□□ -0.42
CXCL1-202ENST00000509101 PXT1Q8NFP0 134 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 OR8J1Q8NGP2 316 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 TNFAIP8L1Q8WVP5 186 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 ISOC1Q96CN7 298 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 PELI1Q96FA3 418 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 GPER1Q99527 375 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 RIBC2Q9H4K1 309 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
CXCL1-202ENST00000509101 TMEM30CPA0ZSE6 113 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 G3V318 75 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 C15orf65H3BRN8 121 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 J3QLW9 94 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 ZNF19P17023 458 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 PPIFP30405 207 aaKnown RBP12.39□□□□□ -0.43
CXCL1-202ENST00000509101 SLURP1P55000 103 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 ALKBH1Q13686 389 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms