RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 C5orf56Q8N8D9 126 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 ZNF485Q8NCK3 441 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 OR52M1Q8NGK5 317 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 OR10X1Q8NGY0 326 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 CCDC107Q8WV48 283 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 GGHQ92820 318 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 ARL11Q969Q4 196 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 TMEM80Q96HE8 168 aa9.9□□□□□ -0.82
PDPN-208ENST00000509009 ZNF184Q99676 751 aaPredicted RBP9.9□□□□□ -0.82
PDPN-208ENST00000509009 PAK1IP1Q9NWT1 392 aaPredicted RBP9.9□□□□□ -0.82
PDPN-208ENST00000509009 TRAV8-7A0A075B6U6 113 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 PSMB11A5LHX3 300 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 FGF16O43320 207 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 ORC5O43913 435 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 ZNF780AO75290 641 aaPredicted RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 IGKV1D-33P01593 117 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 IGKV1-33P01594 117 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 PF4P02776 101 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 GAPDHP04406 335 aaKnown RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 GTF2F2P13984 249 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 MYL12AP19105 171 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 SERPINA2P20848 420 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 ADARB1P78563 741 aaKnown RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 ZNF816Q0VGE8 651 aaPredicted RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 RIPK1Q13546 671 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 LRRC36Q1X8D7 754 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 MPV17LQ2QL34 196 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 Q499Y3 187 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 SLC22A6Q4U2R8 563 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 FAM53AQ6NSI3 398 aaPredicted RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 ZNF497Q6ZNH5 498 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 MOB3BQ86TA1 216 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 LINC00596Q86U02 117 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 LINC00311Q8N616 119 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 ZFP41Q8N8Y5 198 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 UBALD1Q8TB05 177 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 CYGBQ8WWM9 190 aa9.89□□□□□ -0.83
PDPN-208ENST00000509009 RCC1LQ96I51 464 aaKnown RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 NOL4LQ96MY1 436 aaPredicted RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 CHCHD3Q9NX63 227 aaKnown RBP9.89□□□□□ -0.83
PDPN-208ENST00000509009 TRBV5-7A0A0A0MS05 114 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 IGHV1-3A0A0C4DH29 117 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 A0A1W2PPK0 400 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 MAGEA13PA6NCF6 341 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 LINC01548A6NM66 108 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 CCRL2O00421 344 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 IGHG2P01859 326 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 SLC35A2P78381 396 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 ST3GAL4Q11206 333 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 GPR176Q14439 515 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 YIF1BQ5BJH7 314 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 KHDC1LQ5JSQ8 128 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 DHRSXQ8N5I4 330 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 C8orf31Q8N9H6 132 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 CHPT1Q8WUD6 406 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 ST6GALNAC6Q969X2 333 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 EAF1Q96JC9 268 aaPredicted RBP9.88□□□□□ -0.83
PDPN-208ENST00000509009 PGLYRP3Q96LB9 341 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 GFOD1Q9NXC2 390 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 LINC00527Q9UJ94 153 aa9.88□□□□□ -0.83
PDPN-208ENST00000509009 IGHV3-43A0A0B4J1X8 118 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 IGHV3-72A0A0B4J1Y9 119 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 SERPINE3A8MV23 424 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 K7EIL1 84 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 SDCBPO00560 298 aaPredicted RBP9.87□□□□□ -0.83
PDPN-208ENST00000509009 HSD17B6O14756 317 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 MPIG6BO95866 241 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 IGHV3-43DP0DP04 118 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 REG1BP48304 166 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 KRTAP10-11P60412 298 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 RPL23AP62750 156 aaKnown RBP9.87□□□□□ -0.83
PDPN-208ENST00000509009 MED21Q13503 144 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 GLIPR1L1Q6UWM5 242 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 ETV3LQ6ZN32 361 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 C18orf65Q6ZTR6 163 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 LYPD6Q86Y78 171 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 CDH26Q8IXH8 852 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 Q8N6K4 173 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 PACRGLQ8N7B6 248 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 LINC00482Q8N8I6 264 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 SETD9Q8NE22 299 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 NEK7Q8TDX7 302 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 MUL1Q969V5 352 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 MRPS24Q96EL2 167 aaKnown RBP9.87□□□□□ -0.83
PDPN-208ENST00000509009 PLSCR3Q9NRY6 295 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 ZFP57Q9NU63 452 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 RCC2Q9P258 522 aaKnown RBP9.87□□□□□ -0.83
PDPN-208ENST00000509009 CKLFQ9UBR5 152 aa9.87□□□□□ -0.83
PDPN-208ENST00000509009 MRPS28Q9Y2Q9 187 aaKnown RBP9.87□□□□□ -0.83
PDPN-208ENST00000509009 NCBP2LA6PVI3 153 aaKnown RBP9.86□□□□□ -0.83
PDPN-208ENST00000509009 C12orf77C9JDV5 145 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 MCRIP1C9JLW8 97 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 AIPO00170 330 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 DUS4LO95620 317 aaKnown RBP9.86□□□□□ -0.83
PDPN-208ENST00000509009 FSTP19883 344 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 CD1BP29016 333 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 THBS3P49746 956 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 ZNF134P52741 427 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 COL7A1Q02388 2944 aa9.86□□□□□ -0.83
PDPN-208ENST00000509009 Q3ZCU0 254 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms