RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 MPPE1Q53F39 396 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 C10orf120Q5SQS8 335 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 FAAP20Q6NZ36 180 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 WDR73Q6P4I2 378 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 TEX38Q6PEX7 206 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 WDR74Q6RFH5 385 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 PAQR9Q6ZVX9 377 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ABHD12BQ7Z5M8 362 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HOGA1Q86XE5 327 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CATSPERDQ86XM0 798 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF595Q8IYB9 648 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CSNK1A1LQ8N752 337 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 POC1AQ8NBT0 407 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 OR4K1Q8NGD4 311 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 OR5D18Q8NGL1 313 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 OR8S1Q8NH09 359 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 OR4X1Q8NH49 305 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SKA2Q8WVK7 121 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 TMEM234Q8WY98 164 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 C11orf40Q8WZ69 217 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HAS2Q92819 552 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 EMG1Q92979 244 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 NEIL2Q969S2 332 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 FGGYQ96C11 551 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SLAMF6Q96DU3 332 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 PGAM5Q96HS1 289 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 OR10C1Q96KK4 312 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 AMDHD1Q96NU7 426 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 TBX15Q96SF7 602 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 AGMATQ9BSE5 352 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SCRT1Q9BWW7 348 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HCAR1Q9BXC0 346 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 NMNAT2Q9BZQ4 307 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 PRSS16Q9NQE7 514 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ZCCHC3Q9NUD5 404 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 TMEM106BQ9NUM4 274 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF586Q9NXT0 402 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CNIH4Q9P003 139 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 FBXL17Q9UF56 701 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 NAT8Q9UHE5 227 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SMPXQ9UHP9 88 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 C14orf166Q9Y224 244 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 LAMTOR2Q9Y2Q5 125 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 MED31Q9Y3C7 131 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 USP9XQ93008 2570 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NUP205Q92621 2012 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TRBV9A0A0B4J1U6 114 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NPIPA5A0A0B4J1W7 369 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR6C6A6NF89 314 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 HHLA1C9JL84 531 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 C9JQL5 133 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PRAC2D3DTV9 90 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NPIPA5E9PKD4 350 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NPIPA3F8WFD2 350 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 H7BYZ3 331 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 K7N7A8 449 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SIRPB1O00241 398 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 CCL25O15444 150 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NME2P1O60361 137 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 LMX1BO60663 402 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SMPD2O60906 423 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 CTSVO60911 334 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 NDUFB2O95178 105 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 CH25HO95992 272 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 REG1AP05451 166 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR10J4P0C629 311 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SLC35E2P0CK97 266 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PGA4P0DJD7 388 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PGA3P0DJD8 388 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PGA5P0DJD9 388 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 OR13C7P0DN81 318 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 MMP9P14780 707 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 AKR1C4P17516 323 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SFTPDP35247 375 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 APLNRP35414 380 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 CEACAM3P40198 252 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 FGF8P55075 233 aaPredicted RBP3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TMEM33P57088 247 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PFN3P60673 137 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 S100A10P60903 97 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 HTD2P86397 168 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF117Q03924 483 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 BAXQ07812 192 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 IL15RAQ13261 267 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ENDOGQ14249 297 aaKnown RBP3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 GNMTQ14749 295 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TGIF1Q15583 401 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SLC9A3R2Q15599 337 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 EXT1Q16394 746 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 PRSS8Q16651 343 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 TP53I3Q53FA7 332 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 ACTL10Q5JWF8 245 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 STPG1Q5TH74 334 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 WSCD1Q658N2 575 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 DGAT2L7PQ6IED9 249 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 SLC8B1Q6J4K2 584 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 FAM71F2Q6NXP2 309 aa3.89□□□□□ -1.79
PDLIM5-211ENST00000508531 MRPL54Q6P161 138 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms