RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ZNF816Q0VGE8 651 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 STX5Q13190 355 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 C4orf26Q17RF5 130 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 RGS21Q2M5E4 152 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 ABCA11PQ4W5N1 156 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 ZNF880Q6PDB4 577 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 CASP12Q6UXS9 341 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 ZNF561Q8N587 486 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 C2orf73Q8N5S3 287 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 OR8J2Q8NGG1 315 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 ITLN2Q8WWU7 325 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 TAMM41Q96BW9 452 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 PPCDCQ96CD2 204 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 PACRGQ96M98 296 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 IP6K3Q96PC2 410 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 PEBP4Q96S96 227 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 TMEM38BQ9NVV0 291 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 C3orf18Q9UK00 162 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 TP53TG1Q9Y2A0 90 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 AHDC1Q5TGY3 1603 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 CABIN1Q9Y6J0 2220 aa2.45□□□□□ -2.02
TRAPPC13-209ENST00000508304 PCM1Q15154 2024 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 TRAV40A0A0B4J280 105 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 IZUMO1RA6ND01 250 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 C8orf87E5RJ46 101 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 K7EPK0 472 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 COPEO14579 308 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 IFNA5P01569 189 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 IGHV1-46P01743 117 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 TNNC2P02585 160 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 OR5AC1P0C628 307 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 TGFBR1P36897 503 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 CD79BP40259 229 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 RAP1GDS1P52306 607 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 ELF3P78545 371 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 MAPK14Q16539 360 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 SPIN4Q56A73 249 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 HENMT1Q5T8I9 393 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 TNFAIP8L2Q6P589 184 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 SLC25A34Q6PIV7 304 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 FAM131AQ6UXB0 335 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 LRRN1Q6UXK5 716 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 UNQ9165/PRO28630Q6UXU0 137 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 RASSF6Q6ZTQ3 369 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 FAM19A5Q7Z5A7 132 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 TMEM144Q7Z5S9 345 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 DAZ4Q86SG3 579 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 CPNE9Q8IYJ1 553 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 RIBC1Q8N443 379 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 ZIC4Q8N9L1 334 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 OR2M3Q8NG83 312 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 OR8S1Q8NH09 359 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 MFSD8Q8NHS3 518 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 C17orf50Q8WW18 174 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 CHMP6Q96FZ7 201 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 EBNA1BP2Q99848 306 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 SPIN2AQ99865 258 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 SPIN2BQ9BPZ2 258 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 PRSS27Q9BQR3 290 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 ZNF717Q9BY31 904 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 EIF5A2Q9GZV4 153 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 MS4A6AQ9H2W1 248 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 MAP1LC3AQ9H492 121 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 DAZ1Q9NQZ3 744 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 KCNIP2Q9NS61 270 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 PARVAQ9NVD7 372 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 GUCA1BQ9UMX6 200 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 ABCC11Q96J66 1382 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 PLA2R1Q13018 1463 aa2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 BAZ2AQ9UIF9 1905 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-209ENST00000508304 RIMS2Q9UQ26 1411 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 IGLV3-12A0A075B6K2 115 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 CXCR6O00574 342 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 POP7O75817 140 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 CNMDO75829 334 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 ATP5HO75947 161 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 EPPINO95925 133 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 IGLV7-43P04211 117 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 GUSBP08236 651 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 C8orf88P0DMB2 117 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 PTHLHP12272 177 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 RPS12P25398 132 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 GABRA3P34903 492 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 CDKN2CP42773 168 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 TGM4P49221 684 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 INPP1P49441 399 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 NKX2-5P52952 324 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 SLC35A2P78381 396 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 BASP1P80723 227 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 PPP1R1AQ13522 171 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 TMEM215Q68D42 235 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 COMMD7Q86VX2 200 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 DOLPP1Q86YN1 238 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 SGPP2Q8IWX5 399 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 AMN1Q8IY45 258 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 C10orf67Q8IYJ2 551 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 SLC35G3Q8N808 338 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 FER1L6-AS1Q8NA97 138 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 APCDD1LQ8NCL9 501 aa2.43□□□□□ -2.02
TRAPPC13-209ENST00000508304 SLC37A2Q8TED4 501 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms