RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TRIM25Q14258 630 aaKnown RBP4.47□□□□□ -1.69
GYPB-208ENST00000507009 PTGES3Q15185 160 aaKnown RBP4.47□□□□□ -1.69
GYPB-208ENST00000507009 ZNF124Q15973 351 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 ZSCAN26Q16670 478 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 Q6P435 159 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 Q6ZSR3 168 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 FAM220AQ7Z4H9 259 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 ZNF429Q86V71 674 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 SATL1Q86VE3 508 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 SPATA24Q86W54 205 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 ADGRG5Q8IZF4 528 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 CHST4Q8NCG5 386 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 DNAAF1Q8NEP3 725 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 OR6Q1Q8NGQ2 317 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 OR10K1Q8NGX5 313 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 PLPPR1Q8TBJ4 325 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 CCDC107Q8WV48 283 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 CANT1Q8WVQ1 401 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 DLX4Q92988 240 aaPredicted RBP4.47□□□□□ -1.69
GYPB-208ENST00000507009 ST6GALNAC6Q969X2 333 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 S1PR3Q99500 378 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 MNTQ99583 582 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 OSBPL10Q9BXB5 764 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 PRRG3Q9BZD7 231 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 FAM192AQ9GZU8 254 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 COMMD4Q9H0A8 199 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 GHITMQ9H3K2 345 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 SEBOXQ9HB31 216 aaPredicted RBP4.47□□□□□ -1.69
GYPB-208ENST00000507009 RETNQ9HD89 108 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 ZNF107Q9UII5 783 aaPredicted RBP4.47□□□□□ -1.69
GYPB-208ENST00000507009 VSIG4Q9Y279 399 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 TMA7Q9Y2S6 64 aaKnown RBP4.47□□□□□ -1.69
GYPB-208ENST00000507009 A3GALT2U3KPV4 340 aa4.47□□□□□ -1.69
GYPB-208ENST00000507009 DNAH1Q9P2D7 4330 aa4.46□□□□□ -1.69
GYPB-208ENST00000507009 I3L521 148 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 ATP6V0E1O15342 81 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 SNX3O60493 162 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 KDM4BO94953 1096 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 FAM107AO95990 144 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 IGHV3-11P01762 117 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 CSN2P05814 226 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 GSTP1P09211 210 aaKnown RBP4.46□□□□□ -1.7
GYPB-208ENST00000507009 ARSBP15848 533 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 IL3RAP26951 378 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 PSMB8P28062 276 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 ISL1P61371 349 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 PITPNAQ00169 270 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 ZNF816Q0VGE8 651 aaPredicted RBP4.46□□□□□ -1.7
GYPB-208ENST00000507009 CDK5R1Q15078 307 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 MMDQ15546 238 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 PIGYQ3MUY2 71 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 SPATS1Q496A3 300 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 AADACL4Q5VUY2 407 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 TMEM244Q5VVB8 128 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 NXNL2Q5VZ03 156 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 GID4Q8IVV7 300 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 SGPP2Q8IWX5 399 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 IZUMO1Q8IYV9 350 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 PRR18Q8N4B5 295 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 ZNF491Q8N8L2 437 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 OR10V1Q8NGI7 309 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 OR51A4Q8NGJ6 313 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 OR51T1Q8NGJ9 327 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 CNIH3Q8TBE1 160 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 TMEM163Q8TC26 289 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 NEK7Q8TDX7 302 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 ABHD5Q8WTS1 349 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 RTN4IP1Q8WWV3 396 aaPredicted RBP4.46□□□□□ -1.7
GYPB-208ENST00000507009 ARL11Q969Q4 196 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 SPSB1Q96BD6 273 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 UBE2E2Q96LR5 201 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 OR4C12Q96R67 309 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 GPER1Q99527 375 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 FAM110AQ9BQ89 295 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 TM2D3Q9BRN9 247 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 TMED9Q9BVK6 235 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 BARHL1Q9BZE3 327 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 EDA2RQ9HAV5 297 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 MBNL3Q9NUK0 354 aaKnown RBP4.46□□□□□ -1.7
GYPB-208ENST00000507009 ZNF446Q9NWS9 450 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 ZNF581Q9P0T4 197 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 SORL1Q92673 2214 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 CSMD3Q7Z407 3707 aa4.46□□□□□ -1.7
GYPB-208ENST00000507009 IGHV4OR15-8A0A075B7B6 117 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 A0A087WW49 117 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 TRAV41A0A0B4J266 112 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 TRAV24A0A0B4J272 114 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 A0A1W2PN81 502 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 RBMY1BA6NDE4 496 aaKnown RBP4.45□□□□□ -1.7
GYPB-208ENST00000507009 RBMY1EA6NEQ0 496 aaKnown RBP4.45□□□□□ -1.7
GYPB-208ENST00000507009 LINC01619G3V211 115 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 J3QLW9 94 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 SLC31A2O15432 143 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 FKBP6O75344 327 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 DCTN3O75935 186 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 HTR3BO95264 441 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 IFNA6P05013 189 aa4.45□□□□□ -1.7
GYPB-208ENST00000507009 HTR1AP08908 422 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms